RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GPD2P43304 727 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 ARPC4P59998 168 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 ZNF311Q5JNZ3 666 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 RANBP3LQ86VV4 465 aaPredicted RBP18.16■□□□□ 0.5
SCARB2-213ENST00000638680 WRAP53Q9BUR4 548 aaKnown RBP18.16■□□□□ 0.5
SCARB2-213ENST00000638680 KLF11O14901 512 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 PITPNAQ00169 270 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 SCARB2Q14108 478 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 MSS51Q4VC12 460 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 CHST9Q7L1S5 443 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 OR13C4Q8NGS5 318 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 CLEC4DQ8WXI8 215 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 C5orf34Q96MH7 638 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 MGME1Q9BQP7 344 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 A0A1B0GVM2 712 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 CEBPGP53567 150 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 SLC10A6Q3KNW5 377 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 ULK3Q6PHR2 472 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 SLC22A16Q86VW1 577 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 FATE1Q969F0 183 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 XPNPEP1Q9NQW7 623 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 SLC2A2P11168 524 aaPredicted RBP18.16■□□□□ 0.5
SCARB2-213ENST00000638680 DNAJA1P31689 397 aaKnown RBP18.16■□□□□ 0.5
SCARB2-213ENST00000638680 NFKB2Q00653 900 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 C6orf89Q6UWU4 347 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 SLC35G5Q96KT7 338 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 FCRL5Q96RD9 977 aa18.16■□□□□ 0.5
SCARB2-213ENST00000638680 MTERF1Q99551 399 aaKnown RBP18.16■□□□□ 0.5
SCARB2-213ENST00000638680 TXNL4AP83876 142 aaKnown RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 OR4C6Q8NH72 309 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TRPM4Q8TD43 1214 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3DA0A087WVF3 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3IA0A087WXS9 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3EA0A087X179 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3KA0A087X1G2 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3FA6NER0 549 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3LB9A6J9 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 SCGNO76038 276 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 C8BP07358 591 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3HP0C7X1 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 ANXA8P13928 327 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 CBX5P45973 191 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 GAD2Q05329 585 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 WSCD2Q2TBF2 565 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3GQ6DHY5 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3CQ6IPX1 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TNFAIP8L2Q6P589 184 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBC1D3Q8IZP1 549 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 GLIS1Q8NBF1 620 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 ITPAQ9BY32 194 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 RIMKLBQ9ULI2 386 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 FKBP7Q9Y680 259 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 FAAH2Q6GMR7 532 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PAQR3Q6TCH7 311 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 POLR2J3Q9H1A7 115 aaKnown RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 CTPS2Q9NRF8 586 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 OR6C70A6NIJ9 312 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 K7EPI3 171 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 SOWAHAQ2M3V2 549 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TPRG1LQ5T0D9 272 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PEX5LQ8IYB4 626 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 SMG8Q8ND04 991 aaKnown RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 TBX5Q99593 518 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 A0A1W2PQ67 120 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PDPK1O15530 556 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PTGS2P35354 604 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PNLIPRP1P54315 467 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PRR5P85299 388 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 HEPACAMQ14CZ8 416 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 ANKRD23Q86SG2 305 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 SLITRK4Q8IW52 837 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 FIBCD1Q8N539 461 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 SRFBP1Q8NEF9 429 aaKnown RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 ING5Q8WYH8 240 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 C12orf43Q96C57 262 aaKnown RBP18.15■□□□□ 0.5
SCARB2-213ENST00000638680 PREBQ9HCU5 417 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 UPB1Q9UBR1 384 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 CFL2Q9Y281 166 aa18.15■□□□□ 0.5
SCARB2-213ENST00000638680 ANXA2P2A6NMY6 339 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 C9IYK1 514 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PMM2O15305 246 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 DLX3O60479 287 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 ECI2O75521 394 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 ANXA2P07355 339 aaKnown RBP18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CSTF2P33240 577 aaKnown RBP eCLIP18.14■□□□□ 0.49
SCARB2-213ENST00000638680 RYKP34925 604 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 GJA9P57773 515 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 ATXN7L2Q5T6C5 722 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-213ENST00000638680 IFT27Q9BW83 186 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 MIR1-1HGQ9H1L0 117 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PHPT1Q9NRX4 125 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CALML5Q9NZT1 146 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 LRRC42Q9Y546 428 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 TRBV23OR9-2A0A075B6M9 112 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 LOC100130705A0A1B0GUX0 176 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 ARL5CA6NH57 179 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 SAP18O00422 153 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms