RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CUL1Q13616 776 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 TMED2Q15363 201 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 RBM20Q5T481 1227 aaKnown RBP21.14■□□□□ 0.97
SCN1B-206ENST00000638536 KLHL35Q6PF15 583 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 PRSS42Q7Z5A4 293 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 AMIGO1Q86WK6 493 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 MMGT1Q8N4V1 131 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 ZBTB2Q8N680 514 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 MENTQ9BUN1 341 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 SIDT1Q9NXL6 827 aaKnown RBP21.14■□□□□ 0.97
SCN1B-206ENST00000638536 MOCS1Q9NZB8 636 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 DMGDHQ9UI17 866 aaKnown RBP21.14■□□□□ 0.97
SCN1B-206ENST00000638536 VPS9D1Q9Y2B5 631 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 PCDHGA7Q9Y5G6 932 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 PSAT1Q9Y617 370 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 ZFYVE26Q68DK2 2539 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 E5RI56 91 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 KPNA5O15131 536 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 SSTR1P30872 391 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 DNTTIP2Q5QJE6 756 aaKnown RBP21.13■□□□□ 0.97
SCN1B-206ENST00000638536 ANKS6Q68DC2 871 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 KLHL6Q8WZ60 621 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 IL17FQ96PD4 163 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 GPR21Q99679 349 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 AARSD1Q9BTE6 412 aaKnown RBP21.13■□□□□ 0.97
SCN1B-206ENST00000638536 ZNF768Q9H5H4 540 aaKnown RBP21.13■□□□□ 0.97
SCN1B-206ENST00000638536 SMYD2Q9NRG4 433 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 SEMA5BQ9P283 1151 aa21.13■□□□□ 0.97
SCN1B-206ENST00000638536 NVLO15381 856 aaKnown RBP21.12■□□□□ 0.97
SCN1B-206ENST00000638536 BDKRB1P46663 353 aa21.12■□□□□ 0.97
SCN1B-206ENST00000638536 PCBP4P57723 403 aaKnown RBP21.12■□□□□ 0.97
SCN1B-206ENST00000638536 KCNAB1Q14722 419 aa21.12■□□□□ 0.97
SCN1B-206ENST00000638536 SKA2Q8WVK7 121 aaPredicted RBP21.12■□□□□ 0.97
SCN1B-206ENST00000638536 SEC14L1Q92503 715 aa21.12■□□□□ 0.97
SCN1B-206ENST00000638536 SLC39A1Q9NY26 324 aa21.12■□□□□ 0.97
SCN1B-206ENST00000638536 SPHK1Q9NYA1 384 aa21.12■□□□□ 0.97
SCN1B-206ENST00000638536 GSAPA4D1B5 854 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 B4E171 279 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 NDC80O14777 642 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 TOX3O15405 576 aaPredicted RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 TSPAN7P41732 249 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 MLLT3P42568 568 aaPredicted RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 MC2RQ01718 297 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 GUCY2DQ02846 1103 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 TGIF1Q15583 401 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 KLHL38Q2WGJ6 581 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 ZFAND4Q86XD8 727 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 C2orf73Q8N5S3 287 aaPredicted RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 GSDMBQ8TAX9 411 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CD200R1Q8TD46 325 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 PYROXD1Q8WU10 500 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 KCNJ9Q92806 393 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 TAAR9Q96RI9 348 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 ZDHHC18Q9NUE0 388 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 POLG2Q9UHN1 485 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 POMT2Q9UKY4 750 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 SEC16AO15027 2179 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 A0A087WV48 116 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CTAGE15A4D2H0 777 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 C1orf105O95561 183 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CTAGE8P0CG41 777 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 NELFEP18615 380 aaKnown RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 PRDX3P30048 256 aaKnown RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 PEBP1P30086 187 aaKnown RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CDKN2DP55273 166 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 GPX6P59796 221 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 FRG1Q14331 258 aaKnown RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 UNC5DQ6UXZ4 953 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CTAGE6Q86UF2 777 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CTAGE4Q8IX94 777 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 LINC01555Q8NAE3 123 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 FLVCR1-AS1Q8TAF5 88 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 HNRNPLLQ8WVV9 542 aaKnown RBP21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CRELD1Q96HD1 420 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 SLC41A2Q96JW4 573 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 TWSG1Q9GZX9 223 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CCDC68Q9H2F9 335 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 DHRS7Q9Y394 339 aa21.11■□□□□ 0.97
SCN1B-206ENST00000638536 CHD6Q8TD26 2715 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 TLCD2A6NGC4 264 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 MATN4O95460 622 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 FOLR1P15328 257 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 TUBB2AQ13885 445 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 ARMC6Q6NXE6 501 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 C19orf48Q6RUI8 117 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 CYHR1Q6ZMK1 362 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 CCDC25Q86WR0 208 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 ZNF248Q8NDW4 579 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 TUBB2BQ9BVA1 445 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 KLHL25Q9H0H3 589 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 ACTR10Q9NZ32 417 aa21.1■□□□□ 0.97
SCN1B-206ENST00000638536 CXorf49A8MYA2 514 aaPredicted RBP21.09■□□□□ 0.97
SCN1B-206ENST00000638536 EIF3HO15372 352 aaKnown RBP eCLIP21.09■□□□□ 0.97
SCN1B-206ENST00000638536 CHRM5P08912 532 aaPredicted RBP21.09■□□□□ 0.97
SCN1B-206ENST00000638536 PVRP15151 417 aa21.09■□□□□ 0.97
SCN1B-206ENST00000638536 FOXM1Q08050 763 aa21.09■□□□□ 0.97
SCN1B-206ENST00000638536 MGAT5Q09328 741 aa21.09■□□□□ 0.97
SCN1B-206ENST00000638536 PRKAA1Q13131 559 aa21.09■□□□□ 0.97
SCN1B-206ENST00000638536 KYNUQ16719 465 aa21.09■□□□□ 0.97
SCN1B-206ENST00000638536 KIAA0408Q6ZU52 694 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms