RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 SLC5A6Q9Y289 635 aa11.72□□□□□ -0.53
CACNA1A-250ENST00000637809 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
CACNA1A-250ENST00000637809 PTRH2Q9Y3E5 179 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-250ENST00000637809 AP1M2Q9Y6Q5 423 aa11.72□□□□□ -0.53
CACNA1A-250ENST00000637809 SPTBP11277 2137 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 H7C0S8 307 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 CBFA2T2O43439 604 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 OR2B3O76000 313 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 UMODP07911 640 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 ACADLP28330 430 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 DCDP81605 110 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 OTUD4Q01804 1114 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 SPARCL1Q14515 664 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 ZRANB3Q5FWF4 1079 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 C11orf63Q6NUN7 778 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 MRPL14Q6P1L8 145 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 Q6ZS92 163 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 CUZD1Q86UP6 607 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 CLEC1AQ8NC01 280 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 OR5AR1Q8NGP9 310 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 OR2Y1Q8NGV0 311 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 CCDC110Q8TBZ0 833 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 ACTL9Q8TC94 416 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 PROKR1Q8TCW9 393 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 TBL1YQ9BQ87 522 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 ANP32EQ9BTT0 268 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 SLC22A11Q9NSA0 550 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 DHCR7Q9UBM7 475 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 CDYLQ9Y232 598 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
CACNA1A-250ENST00000637809 ANKUB1A6NFN9 424 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 ZSCAN9O15535 394 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 KCNN4O15554 427 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 PJA2O43164 708 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 ALPPP05187 535 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 CHRM5P08912 532 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 GSTM1P09488 218 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 TPM1P09493 284 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 ITGAXP20702 1163 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 SHMT2P34897 504 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 FOLR3P41439 243 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 GCGRP47871 477 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 COPS2P61201 443 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 GSTM4Q03013 218 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 TBX2Q13207 712 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 DBN1Q16643 649 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 NKAIN1Q4KMZ8 207 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 LYPLAL1Q5VWZ2 237 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 KCTD11Q693B1 232 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 CDKL3Q8IVW4 592 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 DNAJC22Q8N4W6 341 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 ZNF655Q8N720 491 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 SPATA13Q96N96 652 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 FAM118BQ9BPY3 351 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 ILKAPQ9H0C8 392 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 NLE1Q9NVX2 485 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 IFT80Q9P2H3 777 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 FEZ2Q9UHY8 353 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 EFR3BQ9Y2G0 817 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 CSAG2Q9Y5P2 127 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 COPG1Q9Y678 874 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 PRSS21Q9Y6M0 314 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 OTOGQ6ZRI0 2925 aa11.7□□□□□ -0.54
CACNA1A-250ENST00000637809 A0A0J9YY10 115 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 BHMG1C9JSJ3 638 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 PEX12O00623 359 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 IPO13O94829 963 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 AP2A2O94973 939 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 IGHEP01854 428 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 RBP3P10745 1247 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 PSMA3P25788 255 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 PEBP1P30086 187 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 CTNNA1P35221 906 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 PTPN7P35236 360 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 MAGEA1P43355 309 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 EIF3EP60228 445 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 SLC9A5Q14940 896 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 TICAM1Q8IUC6 712 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 CNGA4Q8IV77 575 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 TBC1D21Q8IYX1 336 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 UBE2Q2Q8WVN8 375 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 PTERQ96BW5 349 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 CDKN2AIPNLQ96HQ2 116 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 C5orf34Q96MH7 638 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 AP1M1Q9BXS5 423 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 OSBPL8Q9BZF1 889 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 OR6C2Q9NZP2 312 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 NDOR1Q9UHB4 597 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 GPN3Q9UHW5 284 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 SRPK3Q9UPE1 567 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 ASF1AQ9Y294 204 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 SEC16AO15027 2179 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 POLEQ07864 2286 aa11.69□□□□□ -0.54
CACNA1A-250ENST00000637809 SLC5A10A0PJK1 596 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms