RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 NME4O00746 187 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 SLC22A2O15244 555 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PSMA4P25789 261 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 YBX1P67809 324 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 CCSMST1Q4G0I0 132 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 C1QTNF12Q5T7M4 302 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 TTC23LQ6PF05 361 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 MACC1Q6ZN28 852 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 CHSY3Q70JA7 882 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 RD3Q7Z3Z2 195 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PNPT1Q8TCS8 783 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 OSCP1Q8WVF1 389 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 SMARCD2Q92925 531 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PPP2R3CQ969Q6 453 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 ISG20Q96AZ6 181 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 FAM210AQ96ND0 272 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 NUSAP1Q9BXS6 441 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 Q9H521 79 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 SLC32A1Q9H598 525 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 MAP10Q9P2G4 905 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 THEGQ9P2T0 379 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PLAGL1Q9UM63 463 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 FADS2P1A8MWK0 482 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PDLIM1O00151 329 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 LATO43561 262 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 BCAS2O75934 225 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 NTRK1P04629 796 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 CASP9P55211 416 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 MEF2AQ02078 507 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 FOLH1Q04609 750 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF234Q14588 700 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 LIPIQ6XZB0 460 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 FAM217AQ8IXS0 508 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PHC3Q8NDX5 983 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 GLYATL1Q969I3 302 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF707Q96C28 371 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 ASB9Q96DX5 294 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PBX4Q9BYU1 374 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 CPEB1Q9BZB8 566 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 TRIM15Q9C019 465 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 CEP44Q9C0F1 390 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 SDR39U1Q9NRG7 319 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 DNAJC11Q9NVH1 559 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 SH3BP4Q9P0V3 963 aa9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 PNMA8BQ9ULN7 279 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-248ENST00000637774 MYOCOSA0A1B0GUC4 107 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 A0A1W2PP18 115 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 DHRS12A0PJE2 317 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 DPPA5A6NC42 116 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 PAK4O96013 591 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 HNF4AP41235 474 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 CSNK1DP48730 415 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 TPD52P55327 224 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 MRPS35P82673 323 aaKnown RBP9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ZFP1Q6P2D0 407 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 PHYKPLQ8IUZ5 450 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 CBARPQ8N350 705 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 LEMD2Q8NC56 503 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 OR10A6Q8NH74 314 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 AIG1Q9NVV5 245 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 GPR45Q9Y5Y3 372 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 PGM3O95394 542 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 PDYNP01213 254 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 LINC00271P0C7V0 271 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF23P17027 643 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF30P17039 623 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 RPS3P23396 243 aaKnown RBP eCLIP9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 S100A3P33764 101 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 GCKP35557 465 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ACADVLP49748 655 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 GSK3BP49841 420 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 TRAF3Q13114 568 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 DMC1Q14565 340 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ANKRD26P1Q6NSI1 321 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 TLDC1Q6P9B6 456 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF621Q6ZSS3 439 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 SZRD1Q7Z422 152 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 C11orf96Q7Z7L8 435 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 SYT12Q8IV01 421 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 PHACTR4Q8IZ21 702 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 FAM110BQ8TC76 370 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 CYGBQ8WWM9 190 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 HERVK_113Q902F9 699 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 NSMCE2Q96MF7 247 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 TMEM79Q9BSE2 394 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 ZSCAN5AQ9BUG6 496 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 OSBPL6Q9BZF3 934 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 PTBP2Q9UKA9 531 aaKnown RBP9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 SNX6Q9UNH7 406 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 LZTS1Q9Y250 596 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 SZT2Q5T011 3432 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 COL4A6Q14031 1691 aa9.45□□□□□ -0.9
CACNA1A-248ENST00000637774 GFRA2O00451 464 aa9.44□□□□□ -0.9
CACNA1A-248ENST00000637774 IFRD1O00458 451 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-248ENST00000637774 MANBAO00462 879 aa9.44□□□□□ -0.9
CACNA1A-248ENST00000637774 SLC6A2P23975 617 aa9.44□□□□□ -0.9
CACNA1A-248ENST00000637774 ADARP55265 1226 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms