RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ZNF835Q9Y2P0 537 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 MEMO1Q9Y316 297 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 C17orf113A0A1B0GUU1 675 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 GAPDHSO14556 408 aaPredicted RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 HPP00738 406 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 MSH3P20585 1137 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 DNAJA1P31689 397 aaKnown RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 SPAM1P38567 509 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 GBE1Q04446 702 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 Q6ZPB1 254 aaPredicted RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 SHISA6Q6ZSJ9 500 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 COX15Q7KZN9 410 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 NT5DC3Q86UY8 548 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 HOOK3Q86VS8 718 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 DNAJC22Q8N4W6 341 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 NAT14Q8WUY8 206 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 RBM41Q96IZ5 413 aaKnown RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 LINC00615Q96LM1 132 aaPredicted RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 MESP1Q9BRJ9 268 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 XKR8Q9H6D3 395 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 SOX17Q9H6I2 414 aaPredicted RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 MRPL47Q9HD33 250 aaKnown RBP17.43■□□□□ 0.38
CLN6-212ENST00000636020 IL17CQ9P0M4 197 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 MYO1AQ9UBC5 1043 aa17.43■□□□□ 0.38
CLN6-212ENST00000636020 USP1O94782 785 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 IST1P53990 364 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 DPYSL3Q14195 570 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 PIGHQ14442 188 aaPredicted RBP17.42■□□□□ 0.38
CLN6-212ENST00000636020 BCL7AQ4VC05 210 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 CCDC70Q6NSX1 233 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 SARM1Q6SZW1 724 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 PHC3Q8NDX5 983 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 CHDHQ8NE62 594 aaPredicted RBP17.42■□□□□ 0.38
CLN6-212ENST00000636020 NANOS1Q8WY41 292 aaKnown RBP17.42■□□□□ 0.38
CLN6-212ENST00000636020 FOXC2Q99958 501 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■□□□□ 9.7
CLN6-212ENST00000636020 SLC25A51Q9H1U9 297 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 ZNF160Q9HCG1 818 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 SMOXQ9NWM0 555 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 IRAK4Q9NWZ3 460 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 PTGFRNQ9P2B2 879 aa17.42■□□□□ 0.38
CLN6-212ENST00000636020 GLYATL1P3A0A0U1RQE8 302 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 A0A1B0GX78 115 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 SGTAO43765 313 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 F10P00742 488 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 TPM2P07951 284 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 PIM1P11309 404 aaPredicted RBP17.41■□□□□ 0.38
CLN6-212ENST00000636020 GZMAP12544 262 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 UGT2B7P16662 529 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 AKT1P31749 480 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 ITGA9Q13797 1035 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 SLC14A2Q15849 920 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 CDKAL1Q5VV42 579 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 TTLL10Q6ZVT0 673 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 NCCRP1Q6ZVX7 275 aaPredicted RBP17.41■□□□□ 0.38
CLN6-212ENST00000636020 KBTBD2Q8IY47 623 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 NIPA2Q8N8Q9 360 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 CCDC110Q8TBZ0 833 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 DLG3Q92796 817 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 OR2A14Q96R47 310 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 CEP41Q9BYV8 373 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 TRABDQ9H4I3 376 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 DLL4Q9NR61 685 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 FANCLQ9NW38 375 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 NXT1Q9UKK6 140 aaKnown RBP17.41■□□□□ 0.38
CLN6-212ENST00000636020 PLCL2Q9UPR0 1127 aa17.41■□□□□ 0.38
CLN6-212ENST00000636020 MRPS2Q9Y399 296 aaKnown RBP17.41■□□□□ 0.38
CLN6-212ENST00000636020 VPS13CQ709C8 3753 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 AKAP6Q13023 2319 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 VSTM2BA6NLU5 285 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 PPP2R2AP63151 447 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 PPIDQ08752 370 aaKnown RBP17.4■□□□□ 0.38
CLN6-212ENST00000636020 SPPL2CQ8IUH8 684 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 PQLC3Q8N755 202 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 SPATA22Q8NHS9 363 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 FLVCR1-AS1Q8TAF5 88 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 HM13Q8TCT9 377 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 BRIX1Q8TDN6 353 aaKnown RBP17.4■□□□□ 0.38
CLN6-212ENST00000636020 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.4■□□□□ 0.38
CLN6-212ENST00000636020 MAGED4Q96JG8 741 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 MVB12BQ9H7P6 319 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 CTSFQ9UBX1 484 aa17.4■□□□□ 0.38
CLN6-212ENST00000636020 RPH3AQ9Y2J0 694 aaPredicted RBP17.4■□□□□ 0.38
CLN6-212ENST00000636020 PRAMEF2O60811 474 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 PMPCBO75439 489 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 WDPCPO95876 746 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 PRR35P0CG20 571 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 MYBL1P10243 752 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 IGFBP2P18065 325 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 ARSFP54793 590 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 PMP22Q01453 160 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 PRKG2Q13237 762 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 NOMO1Q15155 1222 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 ATP13A4Q4VNC1 1196 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 SIRT6Q8N6T7 355 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 ZNF398Q8TD17 642 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 THAP3Q8WTV1 239 aaPredicted RBP17.39■□□□□ 0.37
CLN6-212ENST00000636020 NRGNQ92686 78 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 ZNF670Q9BS34 389 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 OR52A5Q9H2C5 316 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms