RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PPP3CCP48454 512 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CLK3P49761 638 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CLCN4P51793 760 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 TAF1AQ15573 450 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 UBE2UQ5VVX9 321 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 DLK2Q6UY11 383 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 GCNT7Q6ZNI0 430 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 RNF165Q6ZSG1 346 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 GALNT5Q7Z7M9 940 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 LRRTM3Q86VH5 581 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MON1AQ86VX9 555 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CYP4Z1Q86W10 505 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 ZDHHC21Q8IVQ6 265 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MSRB3Q8IXL7 192 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 AMER2Q8N7J2 671 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 SIDT2Q8NBJ9 832 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 OR4K2Q8NGD2 314 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CD200R1Q8TD46 325 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PPP1R13LQ8WUF5 828 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PROX1Q92786 737 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 ITPAQ9BY32 194 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 SAMD4AQ9UPU9 718 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PABPN1LA6NDY0 278 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 METTL15A6NJ78 407 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PRAMEF11O60813 436 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 ZBTB7AO95365 584 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 TGFBR2P37173 567 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PGFP49763 221 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 GTF2H2Q13888 395 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MAD2L1BPQ15013 274 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 ABRAXAS2Q15018 415 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CLPPQ16740 277 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PROX2Q3B8N5 592 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 STEAP3Q658P3 488 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 KDM4DQ6B0I6 523 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 GTF2H2CQ6P1K8 395 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PNCKQ6P2M8 343 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MILR1Q7Z6M3 343 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 ADAMTSL2Q86TH1 951 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 TRIB3Q96RU7 358 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 TM9SF3Q9HD45 589 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MIOSQ9NXC5 875 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 ASIC5Q9NY37 505 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 FBXO10Q9UK96 956 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 NDRG4Q9ULP0 352 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CCL27Q9Y4X3 112 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 TRBV5-3A0A0A0MS03 114 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 ARL5CA6NH57 179 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 E5RI56 91 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 PSMD11O00231 422 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OR7A17O14581 309 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 TBX1O43435 398 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 GBX1Q14549 363 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 ALG1LQ6GMV1 187 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OR2T5Q6IEZ7 315 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 GLT6D1Q7Z4J2 308 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 SNX20Q7Z614 316 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 PLPP6Q8IY26 295 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 GPC2Q8N158 579 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 ELMOD1Q8N336 334 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 TTC29Q8NA56 475 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OR2T29Q8NH02 315 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 NETO1Q8TDF5 533 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 PDLIM5Q96HC4 596 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OR52E6Q96RD3 313 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 HBEGFQ99075 208 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 CLMPQ9H6B4 373 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 HECAQ9UBI9 543 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OPTCQ9UBM4 332 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 RAD51BO15315 384 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 NIPSNAP2O75323 286 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 S100A5P33763 92 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 PSEN2P49810 448 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 PTGR1Q14914 329 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 SPANXN4Q5MJ08 99 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 C6orf183Q5T699 404 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OVOS1Q6IE37 1185 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 USP43Q70EL4 1123 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 OR10T2Q8NGX3 314 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 CAPSLQ8WWF8 208 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 RPL3LQ92901 407 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 TINF2Q9BSI4 451 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 IPPKQ9H8X2 491 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 SLCO3A1Q9UIG8 710 aa14.5□□□□□ -0.09
CACNA1A-220ENST00000635988 POLR2AP24928 1970 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 GOLGA8CPA6NN73 597 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 DRGXA6NNA5 263 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 ADM5C9JUS6 153 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 PER2O15055 1255 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 MUSKO15146 869 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 AIREO43918 545 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 B3GAT3O94766 335 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 KCNK2O95069 426 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 CNPP09543 421 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 FPR1P21462 350 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 TCEA1P23193 301 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 DNAJA1P31689 397 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 RCVRNP35243 200 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 GNPDA1P46926 289 aa14.49□□□□□ -0.09
CACNA1A-220ENST00000635988 TRPC1P48995 793 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms