RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LMOD3Q0VAK6 560 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 UBE2V1Q13404 147 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ACVR2BQ13705 512 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 EIF4A2Q14240 407 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF234Q14588 700 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 RRS1Q15050 365 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ADIPOQQ15848 244 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF239Q16600 458 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 PRICKLE4Q2TBC4 344 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM30BQ3MIR4 351 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 CDONQ4KMG0 1287 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SETMARQ53H47 684 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 IGSF11Q5DX21 431 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 RILPL1Q5EBL4 403 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 WDR78Q5VTH9 848 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SFMBT2Q5VUG0 894 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ZDHHC20Q5W0Z9 365 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 NSUN5P2Q63ZY6 315 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 FRG2Q64ET8 278 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM198Q66K66 360 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SPINK14Q6IE38 97 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 NCEH1Q6PIU2 408 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 C19orf48Q6RUI8 117 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SARM1Q6SZW1 724 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 GFRALQ6UXV0 394 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 GLDNQ6ZMI3 551 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF704Q6ZNC4 412 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SEPT14Q6ZU15 432 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ASB18Q6ZVZ8 466 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 CHST9Q7L1S5 443 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 FASTKD5Q7L8L6 764 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 LONP2Q86WA8 852 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TICAM1Q8IUC6 712 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ARID3BQ8IVW6 561 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 CHERPQ8IWX8 916 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 C1orf87Q8N0U7 546 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TAGAPQ8N103 731 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 RASGEF1CQ8N431 466 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TTC39CQ8N584 583 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 NGEFQ8N5V2 710 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC5A8Q8N695 610 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ANKRD52Q8NB46 1076 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 MCUQ8NE86 351 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 PPHLN1Q8NEY8 458 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 IL17REQ8NFR9 667 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 OR52I2Q8NH67 350 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 OR5R1Q8NH85 324 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 THAP6Q8TBB0 222 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ZFAND2BQ8WV99 257 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SGCDQ92629 289 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 USP6NLQ92738 828 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TAAR8Q969N4 342 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 LRRC59Q96AG4 307 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM143Q96AN5 459 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SKA1Q96BD8 255 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 RHBDF1Q96CC6 855 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ERLEC1Q96DZ1 483 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ALG14Q96F25 216 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 PERPQ96FX8 193 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM81BQ96LP2 452 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 C7orf26Q96N11 449 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 PRAM1Q96QH2 718 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 BARD1Q99728 777 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SRSF8Q9BRL6 282 aaKnown RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 LRRC1Q9BTT6 524 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 CHMP4AQ9BY43 222 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 UBXN6Q9BZV1 441 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM39BQ9GZU3 492 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 KCNN2Q9H2S1 579 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 DENND2DQ9H6A0 471 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SYNCQ9H7C4 482 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 FKRPQ9H9S5 495 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 PLEKHA5Q9HAU0 1116 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SCPEP1Q9HB40 452 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 EPB41L5Q9HCM4 733 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 CHMP1AQ9HD42 196 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 RPS10P5Q9NQ39 176 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC7A10Q9NS82 523 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM30AQ9NV96 361 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 HCFC1R1Q9NWW0 138 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TAS2R14Q9NYV8 317 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 POLG2Q9UHN1 485 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 FBXW11Q9UKB1 542 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 NENFQ9UMX5 172 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 KCNK7Q9Y2U2 307 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 PCDHGA5Q9Y5G8 931 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 KLF2Q9Y5W3 355 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 LYVE1Q9Y5Y7 322 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 NPHP3Q7Z494 1330 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 KDM3AQ9Y4C1 1321 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 SBNO1A3KN83 1393 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 POLR3AO14802 1390 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGEF10O15013 1369 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 KDRP35968 1356 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 OBSL1O75147 1896 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 NSD3Q9BZ95 1437 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TRIP11Q15643 1979 aa1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 TNRC18O15417 2968 aaPredicted RBP1.05□□□□□ -2.24
SMARCB1-209ENST00000635578 MYO9BQ13459 2157 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A0G2JLW4 131 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms