RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 ZNF514Q96K75 400 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 B3GALT6Q96L58 329 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 ORAI3Q9BRQ5 295 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 GPATCH1Q9BRR8 931 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 POLR3BQ9NW08 1133 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 RPH3AQ9Y2J0 694 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PCDHGB2Q9Y5G2 931 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 ZNF521Q96K83 1311 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PRORSD1PA6NEY8 169 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 B4GALT2O60909 372 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 ZMPSTE24O75844 475 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PDYNP01213 254 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 HCKP08631 526 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 ZNF35P13682 527 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 SLC1A2P43004 574 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 GTF2BQ00403 316 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 C1orf189Q5VU69 101 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 MBLAC2Q68D91 279 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 CUZD1Q86UP6 607 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 LRRTM4Q86VH4 590 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PLCZ1Q86YW0 608 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 AUTS2Q8WXX7 1259 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 CSPG4P5Q96PW8 444 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 CMKLR1Q99788 373 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 LPIN3Q9BQK8 851 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 ELAC1Q9H777 363 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 IPPKQ9H8X2 491 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 KCNS2Q9ULS6 477 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 GPR34Q9UPC5 381 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 BBIP1A8MTZ0 92 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 SAP18O00422 153 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 TP53I11O14683 189 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 KLF8O95600 359 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PVALBP20472 110 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 CFL1P23528 166 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 HNF1BP35680 557 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 GRIK2Q13002 908 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 CDK10Q15131 360 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 LINGO2Q7L985 606 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 IQCHQ86VS3 1027 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 RELL1Q8IUW5 271 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 CMTR2Q8IYT2 770 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 FN3KQ9H479 309 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PCDHB16Q9NRJ7 776 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 GHRLQ9UBU3 117 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 NENFQ9UMX5 172 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PLEKHA6Q9Y2H5 1048 aa6.32□□□□□ -1.4
SRGAP1-207ENST00000631006 PREX1Q8TCU6 1659 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 OR14I1A6ND48 311 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CYP11A1P05108 521 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CYP1A2P05177 515 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 YBEYP58557 167 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 OLR1P78380 273 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CREB5Q02930 508 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 TTC27Q6P3X3 843 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 SHQ1Q6PI26 577 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 ZNF101Q8IZC7 436 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 OR52J3Q8NH60 311 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 BPIFB1Q8TDL5 484 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 PDLIM2Q96JY6 352 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CHST7Q9NS84 486 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 RUVBL1Q9Y265 456 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 MAN2B2Q9Y2E5 1009 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 TRAF6Q9Y4K3 522 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 C5orf51A6NDU8 294 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CDC7O00311 574 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 SLC30A4O14863 429 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 SMPD1P17405 629 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 NDST2P52849 883 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 ZNF613Q6PF04 617 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 POLNQ7Z5Q5 900 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 SLC30A8Q8IWU4 369 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 RGMAQ96B86 450 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 ADAD1Q96M93 576 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 ABCB9Q9NP78 766 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 SPATA7Q9P0W8 599 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 DLC1Q96QB1 1528 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 DHRS12A0PJE2 317 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 DUXAA6NLW8 204 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 MPPED1O15442 326 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 MPZL2O60487 215 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 THRBP10828 461 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 CHRNB4P30926 498 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 TUBB3Q13509 450 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 GPR68Q15743 365 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 TMEM161BQ8NDZ6 487 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 DBF4BQ8NFT6 615 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 PIWIL2Q8TC59 973 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 ACMSDQ8TDX5 336 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 S100ZQ8WXG8 99 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 NDRG1Q92597 394 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 KCTD15Q96SI1 283 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 SLC5A7Q9GZV3 580 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 PCDHGC4Q9Y5F7 938 aa6.31□□□□□ -1.4
SRGAP1-207ENST00000631006 TIMM8BQ9Y5J9 83 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms