RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 DNAAF5Q86Y56 855 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 S100PBPQ96BU1 408 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 WASF2Q9Y6W5 498 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 RPIAP49247 311 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 C16orf46Q6P387 395 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 SNX3O60493 162 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 DCDC1P59894 354 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 HERC3Q15034 1050 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 SPATS1Q496A3 300 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 ZC3HC1Q86WB0 502 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 GPR65Q8IYL9 337 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 FBXL16Q8N461 479 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 EGFL7Q9UHF1 273 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 ANXA3P12429 323 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 ADAM17P78536 824 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 RAB12Q6IQ22 244 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 GIMAP5Q96F15 307 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 SLC38A3Q99624 504 aa12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 SNRNP25Q9BV90 132 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 MRPS30Q9NP92 439 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-208ENST00000629380 TRIM64CA6NLI5 447 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 RP2O75695 350 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 IL7RP16871 459 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 ACTR1BP42025 376 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 RTP1P59025 263 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 PLEKHG6Q3KR16 790 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 AADACL4Q5VUY2 407 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 SPRYD7Q5W111 196 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 SLC35C1Q96A29 364 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 TNFRSF10BO14763 440 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 TP73O15350 636 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 ANXA4P09525 319 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 HOXB9P17482 250 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 MSR1P21757 451 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 TUBA1BP68363 451 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 DEFA5Q01523 94 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 DUSP28Q4G0W2 176 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 TUBA1AQ71U36 451 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 SRMSQ9H3Y6 488 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 MKKSQ9NPJ1 570 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 TMEM150CB9EJG8 249 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 XKP51811 444 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 MRPS5P82675 430 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 C15orf59Q2T9L4 293 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 VSIG10LQ86VR7 867 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 RNF157Q96PX1 679 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 CDT1Q9H211 546 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 PLEKHA6Q9Y2H5 1048 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 NPIPA5E9PKD4 350 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 EML1O00423 815 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 SPIN4Q56A73 249 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 METTL21CQ5VZV1 264 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 SLC26A9Q7LBE3 791 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 LIX1Q8N485 282 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 GEMIN6Q8WXD5 167 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 FBXO5Q9UKT4 447 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 NPIPA1Q9UND3 350 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 PDE10AQ9Y233 779 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 AZGP1P25311 298 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 ALG10BQ5I7T1 473 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 FAM124AQ86V42 546 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 ZSCAN1Q8NBB4 408 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 KCTD4Q8WVF5 259 aa12.96□□□□□ -0.33
SYNGAP1-208ENST00000629380 OR2AG2A6NM03 316 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 CDH12P55289 794 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 SOX10P56693 466 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 PLEKHN1Q494U1 663 aaPredicted RBP12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 SH3D21A4FU49 640 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 CPSF4LA6NMK7 179 aaKnown RBP12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 EFCAB9A8MZ26 197 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 S100PP25815 95 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 HSPB3Q12988 150 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 PUM1Q14671 1186 aaKnown RBP eCLIP12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF792Q3KQV3 632 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 C6orf52Q5T4I8 152 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 VSTM1Q6UX27 236 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 NATD1Q8N6N6 113 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 KLRG1Q96E93 195 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC5A7Q9GZV3 580 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 CARD8Q9Y2G2 431 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 PRPS2P11908 318 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 DLG2Q15700 870 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 RHBDF2Q6PJF5 856 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 NR4A3Q92570 626 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF285Q96NJ3 590 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 AGAP2Q99490 1192 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 TBL1XR1Q9BZK7 514 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 BRD7Q9NPI1 651 aa12.96□□□□□ -0.34
SYNGAP1-208ENST00000629380 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms