RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ADPRHP54922 357 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 CDH13P55290 713 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 HSPA14Q0VDF9 509 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 GALNT1Q10472 559 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 BOP1Q14137 746 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 SUZ12Q15022 739 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 C18orf21Q32NC0 220 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 LACTB2Q53H82 288 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 PLEKHS1Q5SXH7 462 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 KIAA1324Q6UXG2 1013 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 MTDHQ86UE4 582 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 NAXDQ8IW45 347 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 PDPRQ8NCN5 879 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 OR14C36Q8NHC7 312 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 ESAMQ96AP7 390 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 LENG8Q96PV6 779 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 LGR4Q9BXB1 951 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 KDM4CQ9H3R0 1056 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 CCDC86Q9H6F5 360 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 COG4Q9H9E3 785 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 NUDT4Q9NZJ9 180 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 CD274Q9NZQ7 290 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 ATXN10Q9UBB4 475 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF225Q9UK10 706 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 CFAP47Q6ZTR5 3102 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 LRP4O75096 1905 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 KRT87PA6NCN2 255 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 METTL12A8MUP2 240 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 MEI4A8MW99 385 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 C10orf142B7Z368 130 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SLCO1B7G3V0H7 640 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 STX16-NPEPL1H3BU86 382 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 E2F3O00716 465 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 STX16O14662 325 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 RAD51BO15315 384 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TAPBPO15533 448 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 CDK14O94921 469 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SLCO2B1O94956 709 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 CER1O95813 267 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 S100BP04271 92 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 T-ENOLP0DO92 83 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 EEF1DP29692 281 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ALDH18A1P54886 795 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 NAA20P61599 178 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 RPS21P63220 83 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SH3BP2P78314 561 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 GTF2H3Q13889 308 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SLC9B1Q4ZJI4 515 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 KIAA1161Q6NSJ0 714 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PNCKQ6P2M8 343 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 EPGNQ6UW88 154 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ADAMTSL4Q6UY14 1074 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 MBOAT1Q6ZNC8 495 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 CLNKQ7Z7G1 428 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 C11orf96Q7Z7L8 435 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 AFAP1L2Q8N4X5 818 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TP53I13Q8NBR0 393 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ASZ1Q8WWH4 475 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ELMO1Q92556 727 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ERP27Q96DN0 273 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TOE1Q96GM8 510 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 RILPQ96NA2 401 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 CDC6Q99741 560 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 NMUR2Q9GZQ4 415 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TRIM39Q9HCM9 518 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 FSCN3Q9NQT6 498 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 DNAJC28Q9NX36 388 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 USP36Q9P275 1121 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 VTI1BQ9UEU0 232 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PCTPQ9UKL6 214 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 FZD4Q9ULV1 537 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SLC12A4Q9UP95 1085 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 NCKAP1Q9Y2A7 1128 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 OARD1Q9Y530 152 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ATRXP46100 2492 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SLC5A10A0PJK1 596 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 GFYI3L273 518 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 HDAC3O15379 428 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 FFAR2O15552 330 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 IGLV3-19P01714 112 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PCCBP05166 539 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 FTH1P19P0C7X4 201 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 MPC1LP0DKB6 136 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 HOXB3P14651 431 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF8P17098 575 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PRDX3P30048 256 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 FOXA1P55317 472 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PPP2CBP62714 309 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PPP2CAP67775 309 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 BNIP1Q12981 228 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 GRIK2Q13002 908 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SGCGQ13326 291 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 UGT3A2Q3SY77 523 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 BCL7AQ4VC05 210 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SYTL3Q4VX76 610 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SH2D4BQ5SQS7 431 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms