RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 USP1O94782 785 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 WDPCPO95876 746 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 HPP00738 406 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 ALBP02768 609 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 SLC35G4P0C7Q5 338 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 UGT1A6P19224 532 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 UGT1A1P22309 533 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 GALNT2Q10471 571 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 GSE1Q14687 1217 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 TCP11X2Q5H9J9 407 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 FNBP1LQ5T0N5 605 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 TLDC1Q6P9B6 456 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 KBTBD2Q8IY47 623 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 LILRA3Q8N6C8 439 aaPredicted RBP13.33□□□□□ -0.28
SNX1-214ENST00000625244 CCDC110Q8TBZ0 833 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 AGAP11Q8TF27 550 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 THAP3Q8WTV1 239 aaPredicted RBP13.33□□□□□ -0.28
SNX1-214ENST00000625244 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.33□□□□□ -0.28
SNX1-214ENST00000625244 HSPH1Q92598 858 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 GPR137Q96N19 417 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 DMRTA2Q96SC8 542 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 UGT1A7Q9HAW7 530 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 UGT1A10Q9HAW8 530 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 UGT1A8Q9HAW9 530 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNX1-214ENST00000625244 FANCLQ9NW38 375 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 IRAK4Q9NWZ3 460 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 TAS2R14Q9NYV8 317 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 ACTR10Q9NZ32 417 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 AMACRQ9UHK6 382 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 ST6GALNAC2Q9UJ37 374 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 ACSL5Q9ULC5 683 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 MRPS2Q9Y399 296 aaKnown RBP13.33□□□□□ -0.28
SNX1-214ENST00000625244 MGAT4DA6NG13 374 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 C2orf74A8MZ97 194 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 PMPCBO75439 489 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 PRAMEF1O95521 474 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 ONECUT2O95948 504 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 POLBP06746 335 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 PRR35P0CG20 571 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 GCGRP47871 477 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 MEOX1P50221 254 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 CACNG1Q06432 222 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 TFF3Q07654 80 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 PCOLCEQ15113 449 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 CES4AQ5XG92 561 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 ACAD10Q6JQN1 1059 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 SPESP1Q6UW49 350 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 DET1Q7L5Y6 550 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 DMRTC2Q8IXT2 367 aaPredicted RBP13.32□□□□□ -0.28
SNX1-214ENST00000625244 ADGRF3Q8IZF5 1079 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 PHF10Q8WUB8 498 aaKnown RBP13.32□□□□□ -0.28
SNX1-214ENST00000625244 C8orf44Q96CB5 159 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 ZCCHC2Q9C0B9 1178 aaKnown RBP13.32□□□□□ -0.28
SNX1-214ENST00000625244 TSPAN10Q9H1Z9 355 aaPredicted RBP13.32□□□□□ -0.28
SNX1-214ENST00000625244 SLC26A1Q9H2B4 701 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 XKR8Q9H6D3 395 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 IL26Q9NPH9 171 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 PARVAQ9NVD7 372 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
SNX1-214ENST00000625244 SPO11Q9Y5K1 396 aa13.32□□□□□ -0.28
SNX1-214ENST00000625244 ANK3Q12955 4377 aaKnown RBP13.32□□□□□ -0.28
SNX1-214ENST00000625244 FAM227AF5H4B4 570 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 C8BP07358 591 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 ATP1A3P13637 1013 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 SYCP1Q15431 976 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 SLC5A12Q1EHB4 618 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 CDKAL1Q5VV42 579 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 TXNRD3NBQ6F5E7 133 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 TIGD7Q6NT04 549 aaPredicted RBP13.31□□□□□ -0.28
SNX1-214ENST00000625244 CLEC9AQ6UXN8 241 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 TTLL10Q6ZVT0 673 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 DAAM2Q86T65 1068 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 DOLPP1Q86YN1 238 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 DDHD1Q8NEL9 900 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 OR52E1Q8NGJ3 308 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 OR2L2Q8NH16 312 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 VPS50Q96JG6 964 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 AGPAT1Q99943 283 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 XPO4Q9C0E2 1151 aaKnown RBP13.31□□□□□ -0.28
SNX1-214ENST00000625244 TFB2MQ9H5Q4 396 aaKnown RBP13.31□□□□□ -0.28
SNX1-214ENST00000625244 PCDH18Q9HCL0 1135 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 KCNN3Q9UGI6 736 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 PPT2Q9UMR5 302 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 HEBP2Q9Y5Z4 205 aa13.31□□□□□ -0.28
SNX1-214ENST00000625244 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 A0A1B0GX78 115 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 NKX2-6A6NCS4 301 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 E9PLN8 166 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 ZWINTO95229 277 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 CELA2AP08217 269 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 RARAP10276 462 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms