RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 MPP4Q96JB8 637 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 VPS50Q96JG6 964 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNF583Q96ND8 569 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 CCDC115Q96NT0 180 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 YME1L1Q96TA2 773 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 CEP44Q9C0F1 390 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 ABCG8Q9H221 673 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLMPQ9H6B4 373 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 ACTR8Q9H981 624 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZFP14Q9HCL3 533 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 C1orf109Q9NX04 203 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 SMPD3Q9NY59 655 aaPredicted RBP8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 VAPAQ9P0L0 249 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNF639Q9UID6 485 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 PDE10AQ9Y233 779 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 NEUROG3Q9Y4Z2 214 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 V9GYQ6 96 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 MYO9BQ13459 2157 aa8.14□□□□□ -1.11
SND1-IT1-201ENST00000623342 A0A1W2PQ67 120 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 DFNA5O60443 496 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 FGF18O76093 207 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 BMP10O95393 424 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 UGT2B4P06133 528 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 PGRP06401 933 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 C8GP07360 202 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 C1SP09871 688 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 RAP2AP10114 183 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 AOAHP28039 575 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 FAM98BQ52LJ0 330 aaKnown RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 LILRA6Q6PI73 481 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 DPY19L3Q6ZPD9 716 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 RFLNAQ6ZTI6 216 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 UBE2R2Q712K3 238 aaPredicted RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 LRRC70Q7Z2Q7 622 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNF786Q8N393 782 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 TCAIMQ8N3R3 496 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 DHRSXQ8N5I4 330 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 MAGEE2Q8TD90 523 aaPredicted RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CYGBQ8WWM9 190 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 SH3GL1Q99961 368 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CORO1BQ9BR76 489 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC12A9Q9BXP2 914 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 EMILIN2Q9BXX0 1053 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 BRD9Q9H8M2 597 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 PARVBQ9HBI1 364 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 ASAH2Q9NR71 780 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 TUBA8Q9NY65 449 aaPredicted RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNHIT2Q9UHR6 403 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 FADS3Q9Y5Q0 445 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CEPT1Q9Y6K0 416 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 A0A087WXM4 84 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 H3BSA7 217 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 GSTA4O15217 222 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLOCKO15516 846 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 NUAK1O60285 661 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 MT-ND1P03886 318 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLTBP09497 229 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 HIST1H2AGP0C0S8 130 aaPredicted RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 EPORP19235 508 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 HIST1H2ADP20671 130 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 NFKBIAP25963 317 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CAPGP40121 348 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 SPINT3P49223 89 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 POLR2LP62875 67 aaKnown RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CYP4F3Q08477 520 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 HSPA14Q0VDF9 509 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 GBX1Q14549 363 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 CPSF6Q16630 551 aaKnown RBP eCLIP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 PLA2G4EQ3MJ16 856 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 USP39Q53GS9 565 aaKnown RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 SPANXN4Q5MJ08 99 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 SUSD1Q6UWL2 747 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 KRTCAP2Q8N6L1 136 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 KREMEN2Q8NCW0 462 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 OR2T12Q8NG77 320 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 MTFMTQ96DP5 389 aaKnown RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 HIST1H2AHQ96KK5 128 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 HIST1H2AJQ99878 128 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 H2AFJQ9BTM1 129 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 THUMPD3Q9BV44 507 aaKnown RBP8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 GORASP2Q9H8Y8 452 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 B4GALT6Q9UBX8 382 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 AP3M1Q9Y2T2 418 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 PLXNB3Q9ULL4 1909 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 PIKFYVEQ9Y2I7 2098 aa8.13□□□□□ -1.11
SND1-IT1-201ENST00000623342 PABPN1LA6NDY0 278 aaKnown RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 EFCAB14O75071 495 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CXCL14O95715 111 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PDYNP01213 254 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 MPC1LP0DKB6 136 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 BCKDHAP12694 445 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CDH2P19022 906 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 HNMTP50135 292 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CHRNB3Q05901 458 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 RBBP5Q15291 538 aaKnown RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 GGTA1PQ4G0N0 100 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms