RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 FAM174BQ3ZCQ3 159 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 GTDC1Q4AE62 458 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 CARD16Q5EG05 197 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 AGAP6Q5VW22 663 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 AHSA2Q719I0 299 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 CEP68Q76N32 757 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 SAPCD2Q86UD0 394 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 GPSM1Q86YR5 675 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 UMODL1-AS1Q8N2C9 162 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 IL17RDQ8NFM7 739 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 PEX13Q92968 403 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 PSMG2Q969U7 264 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 AGAP4Q96P64 663 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 PRDM8Q9NQV8 689 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 TBC1D14Q9P2M4 693 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 N6AMT1Q9Y5N5 214 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 WASH4PA8MWX3 477 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 CENPBD1B2RD01 187 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 TSPAN12O95859 305 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 PPP3CCP48454 512 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 NRG1Q02297 640 aaPredicted RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 ZNF45Q02386 682 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 RUNDC3AQ59EK9 446 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 PRSS36Q5K4E3 855 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 NKAPQ8N5F7 415 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 PYURFQ96I23 114 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 SIGLEC11Q96RL6 698 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 ZBTB18Q99592 522 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 MARCH7Q9H992 704 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 RASSF1Q9NS23 344 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 ZNF221Q9UK13 617 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 GBF1Q92538 1859 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 NOTOA8MTQ0 251 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 DSCR3O14972 297 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 RECQL5O94762 991 aaPredicted RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 CNPP09543 421 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 SLC2A4P14672 509 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 GADD45AP24522 165 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 RPL38P63173 70 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 CDC42EP1Q00587 391 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 PRKCDQ05655 676 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 ABRAXAS2Q15018 415 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 PIK3R6Q5UE93 754 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 KDM4DQ6B0I6 523 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 NLGN4XQ8N0W4 816 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 C10orf111Q8N326 155 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 TEX26Q8N6G2 289 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 TTC29Q8NA56 475 aaPredicted RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 FATE1Q969F0 183 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 UBE2FQ969M7 185 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 CDKN2AIPNLQ96HQ2 116 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 SH3GL1Q99961 368 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 RNF38Q9H0F5 515 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 QPCTLQ9NXS2 382 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 AGO1Q9UL18 857 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 NDRG4Q9ULP0 352 aaKnown RBP13.82□□□□□ -0.2
LDB3-209ENST00000623056 A3GALT2U3KPV4 340 aa13.82□□□□□ -0.2
LDB3-209ENST00000623056 FAM220BPB1ANY3 271 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 SCO2O43819 266 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 FGF1P05230 155 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 IL1RNP18510 177 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 EFNA1P20827 205 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 EPHA2P29317 976 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 GJA5P36382 358 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 KRR1Q13601 381 aaKnown RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 GTF2H3Q13889 308 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 SPANXN4Q5MJ08 99 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 ATAD3CQ5T2N8 411 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 MFSD4BQ5TF39 518 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 CCDC71Q8IV32 467 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 SIDT2Q8NBJ9 832 aaKnown RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 C3orf58Q8NDZ4 430 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 OR6F1Q8NGZ6 308 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 BRSK1Q8TDC3 778 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 IPCEF1Q8WWN9 437 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 MYOCQ99972 504 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 SEMA3CQ99985 751 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 CDADC1Q9BWV3 514 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 SLC6A13Q9NSD5 602 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 ABCC13Q9NSE7 274 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 FBXL12Q9NXK8 326 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 FNIP2Q9P278 1114 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.81□□□□□ -0.2
LDB3-209ENST00000623056 RNF6Q9Y252 685 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 M0R082 166 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 KMOO15229 486 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 SSX4O60224 188 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 NDUFS3O75489 264 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 WBP4O75554 376 aaKnown RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 MMP3P08254 477 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 HLA-DPA1P20036 260 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 HOXA9P31269 272 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 S100A5P33763 92 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms