RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 LRRTM3Q86VH5 581 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 MICU2Q8IYU8 434 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 PARP16Q8N5Y8 322 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 BLOC1S5Q8TDH9 187 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 LPPQ93052 612 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 PSMG2Q969U7 264 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 GIMAP4Q9NUV9 329 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 PAQR5Q9NXK6 330 aaPredicted RBP12.79□□□□□ -0.36
CHD1L-210ENST00000622533 LIMD1Q9UGP4 676 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 PCDHB14Q9Y5E9 798 aa12.79□□□□□ -0.36
CHD1L-210ENST00000622533 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 KLK8O60259 260 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 KATNA1O75449 491 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 PTTG1O95997 202 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 HAPLN1P10915 354 aaPredicted RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 GNG2P59768 71 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CDK10Q15131 360 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 FAM110CQ1W6H9 321 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CADM2Q8N3J6 435 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 PJA1Q8NG27 643 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 C14orf119Q9NWQ9 140 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 SCML2Q9UQR0 700 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 MAU2Q9Y6X3 613 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CCL15-CCL14A0A0B4J2E2 113 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 RAMP2O60895 175 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ECI2O75521 394 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 KRT6CP48668 564 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 AFF1P51825 1210 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 P2RX3P56373 397 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 YBEYP58557 167 aaPredicted RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CCL15Q16663 113 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ATP6AP1LQ52LC2 224 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 MS4A13Q5J8X5 152 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 TPRG1LQ5T0D9 272 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 AFTPHQ6ULP2 937 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ZFAND4Q86XD8 727 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CHCHD4Q8N4Q1 142 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 DCBLD1Q8N8Z6 715 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ZNF540Q8NDQ6 660 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 MED30Q96HR3 178 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 RBM4BQ9BQ04 359 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 PAAF1Q9BRP4 392 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CENPOQ9BU64 300 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 RBM4Q9BWF3 364 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 KAT8Q9H7Z6 458 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 COMMD8Q9NX08 183 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 FBXL12Q9NXK8 326 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ARL5AQ9Y689 179 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 GPR182O15218 404 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 CCDC159P0C7I6 412 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 IFNA8P32881 189 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 BRCC3P46736 316 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ZNF235Q14590 738 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 RBBP7Q16576 425 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 SOWAHCQ53LP3 525 aaPredicted RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 BPHLQ86WA6 291 aaPredicted RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 ACOX2Q99424 681 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 PARK7Q99497 189 aaKnown RBP12.78□□□□□ -0.36
CHD1L-210ENST00000622533 UGT2B28Q9BY64 529 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 RIBC2Q9H4K1 309 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 NMUR1Q9HB89 426 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 PTPRDP23468 1912 aa12.78□□□□□ -0.36
CHD1L-210ENST00000622533 TRIP12Q14669 1992 aaPredicted RBP12.77□□□□□ -0.36
CHD1L-210ENST00000622533 ANKRD36A6QL64 1941 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 UBA6A0AVT1 1052 aaPredicted RBP12.77□□□□□ -0.36
CHD1L-210ENST00000622533 SAGE2PA6NJ88 616 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 TBKBP1A7MCY6 615 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 CENPXA8MT69 81 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 ARNTLO00327 626 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 RPLP2P05387 115 aaKnown RBP12.77□□□□□ -0.36
CHD1L-210ENST00000622533 HOXB6P17509 224 aaKnown RBP12.77□□□□□ -0.36
CHD1L-210ENST00000622533 CD9P21926 228 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 DGKQP52824 942 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 SERINC3Q13530 473 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 SEMA3AQ14563 771 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 SMU1Q2TAY7 513 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 PRAMEF19Q5SWL8 479 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 PAQR3Q6TCH7 311 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 GPRIN3Q6ZVF9 776 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 NEK10Q6ZWH5 1172 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 POP5Q969H6 163 aaKnown RBP12.77□□□□□ -0.36
CHD1L-210ENST00000622533 SLC47A1Q96FL8 570 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 SUSD3Q96L08 255 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 MYOCQ99972 504 aa12.77□□□□□ -0.36
CHD1L-210ENST00000622533 BCL7BQ9BQE9 202 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms