RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PCDHB9Q9Y5E1 797 aa15.46■□□□□ 0.06
NPHP4-211ENST00000622020 ORC6Q9Y5N6 252 aa15.46■□□□□ 0.06
NPHP4-211ENST00000622020 DOCK4Q8N1I0 1966 aa15.46■□□□□ 0.06
NPHP4-211ENST00000622020 IGLV3-10A0A075B6K4 115 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 A0A0U1RQF3 1178 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 A0A1W2PQ67 120 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 AGRPO00253 132 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 JRKO75564 520 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 NKX2-5P52952 324 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 CBX2Q14781 532 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 TAF1AQ15573 450 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 CTXN3Q4LDR2 81 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 ZNF540Q8NDQ6 660 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 CDC26Q8NHZ8 85 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 HEBP1Q9NRV9 189 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 ATAD3AQ9NVI7 634 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 PKP3Q9Y446 797 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 S100BP04271 92 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 TTPAP49638 278 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 CCDC92Q53HC0 331 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 CARD16Q5EG05 197 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 SLC22A16Q86VW1 577 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 RASAL3Q86YV0 1011 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 ADHFE1Q8IWW8 467 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 LKAAEAR1Q8TD35 194 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 LATS2Q9NRM7 1088 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 HCSTQ9UBK5 93 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 TMEFF2Q9UIK5 374 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 AGO1Q9UL18 857 aaKnown RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 ABCG2Q9UNQ0 655 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 EIF3LQ9Y262 564 aaKnown RBP15.45■□□□□ 0.06
NPHP4-211ENST00000622020 PMF1-BGLAPU3KQ54 211 aa15.45■□□□□ 0.06
NPHP4-211ENST00000622020 ANKRD66B4E2M5 251 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 NT5C1B-RDH14C9J2C7 533 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 PER2O15055 1255 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 SH3BGRLO75368 114 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 EPOP01588 193 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 GSTT2P0CG29 244 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 GSTT2BP0CG30 244 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 IGFBP5P24593 272 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 PHC1P78364 1004 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 SPATS1Q496A3 300 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 RGL4Q8IZJ4 473 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 RNF175Q8N4F7 328 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 ULK4Q96C45 1275 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
NPHP4-211ENST00000622020 PDFQ9HBH1 243 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 WWOXQ9NZC7 414 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 LOC730098B7Z3J9 87 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 KLK8O60259 260 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 ULK1O75385 1050 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 LCKP06239 509 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 CDKN2CP42773 168 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 TRAF3Q13114 568 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 SLC14A1Q13336 389 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 ARHGEF7Q14155 803 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 ZNF691Q5VV52 312 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 SBSNQ6UWP8 590 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 B3GNT8Q7Z7M8 397 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
NPHP4-211ENST00000622020 EGLN2Q96KS0 407 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 INTS6Q9UL03 887 aaKnown RBP15.44■□□□□ 0.06
NPHP4-211ENST00000622020 MYO16Q9Y6X6 1858 aa15.44■□□□□ 0.06
NPHP4-211ENST00000622020 AREL1O15033 823 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 MT-ND2P03891 347 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 RCVRNP35243 200 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 TPTEP56180 551 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 DUSP4Q13115 394 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 KIAA0040Q15053 153 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 FXNQ16595 210 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 VARS2Q5ST30 1063 aaKnown RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 ATXN7L2Q5T6C5 722 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 FAM171A1Q5VUB5 890 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 Q6ZPB1 254 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 VTCN1Q7Z7D3 282 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 GPR63Q9BZJ6 419 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 TM6SF2Q9BZW4 377 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 GORASP2Q9H8Y8 452 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 MKI67P46013 3256 aaKnown RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 DRGXA6NNA5 263 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 ARNTLO00327 626 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 TAPBPO15533 448 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 AQP9O43315 295 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 CNOT3O75175 753 aaKnown RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 GKP32189 559 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 CLCN7P51798 805 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 AHSA2Q719I0 299 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 ANKRD13BQ86YJ7 626 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 ZDHHC21Q8IVQ6 265 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 MICU2Q8IYU8 434 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 OR8J3Q8NGG0 315 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 SKA2Q8WVK7 121 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 EID2BQ96D98 161 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 MROQ9BYG7 248 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 PALMDQ9NP74 551 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 DNMT3BQ9UBC3 853 aaKnown RBP15.43■□□□□ 0.06
NPHP4-211ENST00000622020 SLCO3A1Q9UIG8 710 aa15.43■□□□□ 0.06
NPHP4-211ENST00000622020 POU2F3Q9UKI9 436 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms