RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 C22orf39Q6P5X5 142 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 TBPL2Q6SJ96 375 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ERI1Q8IV48 349 aaKnown RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 RASGRP3Q8IV61 690 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ZNF786Q8N393 782 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 LIX1Q8N485 282 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 OR2T12Q8NG77 320 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ITFG1Q8TB96 612 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 FBXL20Q96IG2 436 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 HIC2Q96JB3 615 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 RNF145Q96MT1 663 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 DEFB118Q96PH6 123 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 SEPHS2Q99611 448 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 SH3GL1Q99961 368 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ACPTQ9BZG2 426 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 SUV39H2Q9H5I1 410 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 PDE10AQ9Y233 779 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 MAN2B2Q9Y2E5 1009 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 CCDC160A6NGH7 325 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 LEFTY2O00292 366 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 AREL1O15033 823 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 DEAF1O75398 565 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 SNAP29O95721 258 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ALPLP05186 524 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 C8GP07360 202 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 BCKDHAP12694 445 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 IL1RNP18510 177 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 RPL10P27635 214 aaKnown RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 HLA-FP30511 346 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 STK19P49842 368 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 HNMTP50135 292 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ATN1P54259 1190 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 ARSFP54793 590 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 CYP4F3Q08477 520 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 SP140Q13342 867 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 TRIM60Q495X7 471 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ZBED5Q49AG3 693 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 RUNDC3AQ59EK9 446 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 SPANXN4Q5MJ08 99 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 AP1ARQ63HQ0 302 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 MBOAT1Q6ZNC8 495 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 CALHM3Q86XJ0 350 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 MAGEE2Q8TD90 523 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 SLC22A17Q8WUG5 538 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ASB11Q8WXH4 323 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 POP5Q969H6 163 aaKnown RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 RDH12Q96NR8 316 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 DPY30Q9C005 99 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ZBP1Q9H171 429 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 IKZF5Q9H5V7 419 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 PIF1Q9H611 641 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 TMPRSS11EQ9UL52 423 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 PLXNA2O75051 1894 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 A0A1W2PQ67 120 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 GFYI3L273 518 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 SLC16A5O15375 505 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 KRT6AP02538 564 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 KRT6BP04259 564 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 RETP07949 1114 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 C1SP09871 688 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 MPC1LP0DKB6 136 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 HOXB6P17509 224 aaKnown RBP9.21□□□□□ -0.93
PDPN-212ENST00000621990 KRT6CP48668 564 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 RPIAP49247 311 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 GZMMP51124 257 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 CLDN8P56748 225 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 ATG9BQ674R7 924 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 LILRA6Q6PI73 481 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 TMCO2Q7Z6W1 182 aaPredicted RBP9.21□□□□□ -0.93
PDPN-212ENST00000621990 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 L3MBTL4Q8NA19 623 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 CYGBQ8WWM9 190 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 VPS50Q96JG6 964 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 UGT2B28Q9BY64 529 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 OSBPL6Q9BZF3 934 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 PAIP1Q9H074 479 aaKnown RBP9.21□□□□□ -0.93
PDPN-212ENST00000621990 KAT8Q9H7Z6 458 aaKnown RBP9.21□□□□□ -0.93
PDPN-212ENST00000621990 CARS2Q9HA77 564 aaKnown RBP9.21□□□□□ -0.93
PDPN-212ENST00000621990 PARVBQ9HBI1 364 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 SERHLQ9NQF3 203 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 ARL15Q9NXU5 204 aa9.21□□□□□ -0.93
PDPN-212ENST00000621990 CROCCQ5TZA2 2017 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 A8MX80 341 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 SEC22BO75396 215 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 ERN1O75460 977 aaKnown RBP9.21□□□□□ -0.94
PDPN-212ENST00000621990 SCELO95171 688 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 POP4O95707 220 aaKnown RBP9.21□□□□□ -0.94
PDPN-212ENST00000621990 PDYNP01213 254 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 MT-ND1P03886 318 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 OR56A5P0C7T3 313 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 PTPN6P29350 595 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 PPM1AP35813 382 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 SPINT3P49223 89 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 DEFB103AP81534 67 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 DAG1Q14118 895 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 ARHGEF7Q14155 803 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 IMPG1Q17R60 797 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 PLA2G4EQ3MJ16 856 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 LPCAT2Q7L5N7 544 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 NECAB2Q7Z6G3 386 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms