RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TCEAL5Q5H9L2 206 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 USP53Q70EK8 1073 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 TDRPQ86YL5 185 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 FBXW8Q8N3Y1 598 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 DLG3Q92796 817 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 ZNF576Q9H609 170 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 CTPS2Q9NRF8 586 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 ZDHHC18Q9NUE0 388 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 ARL8BQ9NVJ2 186 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 HRASLS2Q9NWW9 162 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 COPS7AQ9UBW8 275 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 PSAT1Q9Y617 370 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 TEX264Q9Y6I9 313 aa9.06□□□□□ -0.96
GGA3-223ENST00000621870 AGPSO00116 658 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 PCDH7O60245 1069 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 SHOX2O60902 331 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 REM1O75628 298 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 SAGP10523 405 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 PRPS2P11908 318 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 ARSAP15289 507 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CEBPBP17676 345 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 MLLT3P42568 568 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 AVPR1BP47901 424 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CACNA2D1P54289 1103 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TAS2R41P59536 307 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 ERVFC1P60507 584 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CST6Q15828 149 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 KLHL12Q53G59 568 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 DGKKQ5KSL6 1271 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TMEM198Q66K66 360 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 GLYATQ6IB77 296 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TNFAIP8L2Q6P589 184 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 LRRC74BQ6ZQY2 392 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 AADATQ8N5Z0 425 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 NPWQ8N729 165 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TERB1Q8NA31 727 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CHST14Q8NCH0 376 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 GSTCDQ8NEC7 633 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 SMPDL3BQ92485 455 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 RNF31Q96EP0 1072 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 DEPDC7Q96QD5 511 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 BATF3Q9NR55 127 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 MAGEA13PA6NCF6 341 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 MYL12BO14950 172 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 NDUFS4O43181 175 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 EDIL3O43854 480 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 B4GALT2O60909 372 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 KLK3P07288 261 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 MYOGP15173 224 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 NFKB2Q00653 900 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 ZNF648Q5T619 568 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 METTL21CQ5VZV1 264 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 FAM171BQ6P995 826 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 FGD2Q7Z6J4 655 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CILP2Q8IUL8 1156 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 UBR7Q8N806 425 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 BANPQ8N9N5 519 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 C11orf65Q8NCR3 313 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 IMP4Q96G21 291 aaKnown RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 RMND5BQ96G75 393 aaPredicted RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 LRIG1Q96JA1 1093 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 C7orf26Q96N11 449 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TMEM109Q9BVC6 243 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 SLC32A1Q9H598 525 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 LMAN1LQ9HAT1 526 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 C3orf18Q9UK00 162 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CDC14AQ9UNH5 594 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 DCLK1O15075 740 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TSPAN6O43657 245 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 OR1I1O60431 355 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 RNGTTO60942 597 aaKnown RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 TGDSO95455 350 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 FAM58BPP0C7Q3 252 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 MAPK10P53779 464 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 PNLIPRP1P54315 467 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 CLDN10P78369 228 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 SUZ12Q15022 739 aaKnown RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 KHDRBS2Q5VWX1 349 aaKnown RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 SLC8B1Q6J4K2 584 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 PAOXQ6QHF9 649 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 TMIGD1Q6UXZ0 262 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 MCEMP1Q8IX19 187 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 GPR151Q8TDV0 419 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 RAB7BQ96AH8 199 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 HIC2Q96JB3 615 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 ZNF778Q96MU6 729 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 WDR92Q96MX6 357 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 NDC1Q9BTX1 674 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 OR51B5Q9H339 312 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 USP29Q9HBJ7 922 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 DDX28Q9NUL7 540 aaKnown RBP9.05□□□□□ -0.96
GGA3-223ENST00000621870 GDE1Q9NZC3 331 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 VPS29Q9UBQ0 182 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 LGALS13Q9UHV8 139 aa9.05□□□□□ -0.96
GGA3-223ENST00000621870 ENO4A6NNW6 628 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 A8MT66 165 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 LIN7AO14910 233 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 MAFKO60675 156 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 KRT36O76013 467 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 ATP6V1G2O95670 118 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms