RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MAGEC3Q8TD91 643 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 GRAMD1AQ96CP6 724 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 LINGO1Q96FE5 620 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 TSPAN17Q96FV3 270 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 TGM7Q96PF1 710 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 GPR22Q99680 433 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 NRTNQ99748 197 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 STRADBQ9C0K7 418 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 CAB39LQ9H9S4 337 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 KLHL3Q9UH77 587 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 CIDEBQ9UHD4 219 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 PLAGL1Q9UM63 463 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 IGHV5-10-1A0A0J9YXX1 117 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 FAM221BA6H8Z2 402 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 OR5K3A6NET4 321 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 ABHD2P08910 425 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 TPBGLP0DKB5 382 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 SHMT2P34897 504 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 BDKRB1P46663 353 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 PRKAA1Q13131 559 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 SNAP47Q5SQN1 464 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 IRGCQ6NXR0 463 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 WDR93Q6P2C0 686 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 SLITRK4Q8IW52 837 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 MYO1HQ8N1T3 1032 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 ASB11Q8WXH4 323 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 RAD51AP1Q96B01 352 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 ZDHHC12Q96GR4 267 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 CCDC74BQ96LY2 380 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 SYTL2Q9HCH5 934 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 ANGPTL2Q9UKU9 493 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 ICKQ9UPZ9 632 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 ENTPD2Q9Y5L3 495 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 IKBKGQ9Y6K9 419 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 EPG5Q9HCE0 2579 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 CACNA1BQ00975 2339 aa18.04■□□□□ 0.48
CIRBP-245ENST00000621399 PSIP1O75475 530 aaKnown RBP18.03■□□□□ 0.48
CIRBP-245ENST00000621399 CATP04040 527 aaKnown RBP18.03■□□□□ 0.48
CIRBP-245ENST00000621399 ITGA2BP08514 1039 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 STMN1P16949 149 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 POLR2CP19387 275 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-245ENST00000621399 CCKBRP32239 447 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 GFERP55789 205 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 SLC29A2Q14542 456 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 ZNF460Q14592 562 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 CCSMST1Q4G0I0 132 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 CEP97Q8IW35 865 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 RAB33BQ9H082 229 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 POPDC3Q9HBV1 291 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 GPAMQ9HCL2 828 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 PDP2Q9P2J9 529 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 EPHA6Q9UF33 1036 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 MSRB2Q9Y3D2 182 aa18.03■□□□□ 0.48
CIRBP-245ENST00000621399 MN1Q10571 1320 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-245ENST00000621399 GSAPA4D1B5 854 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 A8MU76 341 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 ARHGEF33A8MVX0 844 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 POC1B-GALNT4F8VUJ3 575 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 AGRPO00253 132 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 BTN3A3O00478 584 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 ZBTB14O43829 449 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 TSPAN12O95859 305 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 C9P02748 559 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 INHBAP08476 426 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 THRAP10827 490 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 MAP4P27816 1152 aaKnown RBP18.02■□□□□ 0.48
CIRBP-245ENST00000621399 MSH2P43246 934 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 RAB28P51157 221 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 SHC2P98077 582 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 TRA2AQ13595 282 aaKnown RBP eCLIP18.02■□□□□ 0.48
CIRBP-245ENST00000621399 GRB7Q14451 532 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 TMEM207Q6UWW9 146 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 FAM92BQ6ZTR7 304 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 UBE2R2Q712K3 238 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-245ENST00000621399 RAB42Q8N4Z0 105 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 NKAPQ8N5F7 415 aaKnown RBP18.02■□□□□ 0.48
CIRBP-245ENST00000621399 RCBTB1Q8NDN9 531 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 SLC44A1Q8WWI5 657 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 PAFAH2Q99487 392 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 PARD6BQ9BYG5 372 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 OR6C2Q9NZP2 312 aa18.02■□□□□ 0.48
CIRBP-245ENST00000621399 EXOC1LA0A1B0GW35 172 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 GFYI3L273 518 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 MATN2O00339 956 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 BTN3A1O00481 513 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 RASGRF2O14827 1237 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 RASSF9O75901 435 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 SYF2O95926 243 aaKnown RBP18.01■□□□□ 0.47
CIRBP-245ENST00000621399 C8GP07360 202 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 ZNF37AP17032 561 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-245ENST00000621399 PKLRP30613 574 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 RAB10P61026 200 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 PPP1CAP62136 330 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 BMPR2Q13873 1038 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.01■□□□□ 0.47
CIRBP-245ENST00000621399 MROH9Q5TGP6 573 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 ADGRF3Q8IZF5 1079 aa18.01■□□□□ 0.47
CIRBP-245ENST00000621399 UBLCP1Q8WVY7 318 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-245ENST00000621399 LIN37Q96GY3 246 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-245ENST00000621399 IL17FQ96PD4 163 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms