RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PISDQ9UG56 409 aa17.75■□□□□ 0.43
LITAF-220ENST00000620789 TRMT6Q9UJA5 497 aaKnown RBP17.75■□□□□ 0.43
LITAF-220ENST00000620789 TSR3Q9UJK0 312 aaKnown RBP17.75■□□□□ 0.43
LITAF-220ENST00000620789 RUVBL2Q9Y230 463 aaKnown RBP17.75■□□□□ 0.43
LITAF-220ENST00000620789 TPRP12270 2363 aaKnown RBP17.75■□□□□ 0.43
LITAF-220ENST00000620789 FAM159BA6NKW6 160 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 MATN2O00339 956 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 BTN3A3O00478 584 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 BTN3A1O00481 513 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 KIF1CO43896 1103 aaKnown RBP17.74■□□□□ 0.43
LITAF-220ENST00000620789 SPAG6O75602 509 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 RASSF9O75901 435 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 TNFSF15O95150 251 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 C1orf105O95561 183 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 RHOXF2BP0C7M4 288 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 CBSLP0DN79 551 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 CCL4P13236 92 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 ENO3P13929 434 aaPredicted RBP17.74■□□□□ 0.43
LITAF-220ENST00000620789 ITIH1P19827 911 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 CD9P21926 228 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 CBSP35520 551 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 SKIV2L2P42285 1042 aaKnown RBP17.74■□□□□ 0.43
LITAF-220ENST00000620789 CDKN2DP55273 166 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 KLHL38Q2WGJ6 581 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 FAM45BPQ6NSW5 357 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 TTC23LQ6PF05 361 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 NEK10Q6ZWH5 1172 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 ADGRF3Q8IZF5 1079 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 GPATCH11Q8N954 259 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 FAM45AQ8TCE6 357 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 CD180Q99467 661 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 RHOXF2Q9BQY4 288 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 PLAGL1Q9UM63 463 aa17.74■□□□□ 0.43
LITAF-220ENST00000620789 TLCD2A6NGC4 264 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 CXorf49A8MYA2 514 aaPredicted RBP17.73■□□□□ 0.43
LITAF-220ENST00000620789 EIF3FO00303 357 aaPredicted RBP17.73■□□□□ 0.43
LITAF-220ENST00000620789 PIAS1O75925 651 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 C1QAP02745 245 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 STX2P32856 288 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 CCNFP41002 786 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 ETV5P41161 510 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 ERVPABLB-1P60509 514 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 ILF2Q12905 390 aaKnown RBP17.73■□□□□ 0.43
LITAF-220ENST00000620789 GRB7Q14451 532 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 KYNUQ16719 465 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 TBC1D25Q3MII6 688 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 HECTD2Q5U5R9 776 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 CACHD1Q5VU97 1274 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 ZC3HC1Q86WB0 502 aaKnown RBP17.73■□□□□ 0.43
LITAF-220ENST00000620789 RELL1Q8IUW5 271 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 SPNS2Q8IVW8 549 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 IFT20Q8IY31 132 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 CPNE9Q8IYJ1 553 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 RAD51AP1Q96B01 352 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 ZNF578Q96N58 590 aaPredicted RBP17.73■□□□□ 0.43
LITAF-220ENST00000620789 MCMBPQ9BTE3 642 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 MENTQ9BUN1 341 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 ZNF768Q9H5H4 540 aaKnown RBP17.73■□□□□ 0.43
LITAF-220ENST00000620789 THSD1Q9NS62 852 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 OCIAD1Q9NX40 245 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 OR6C2Q9NZP2 312 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 SEMA5BQ9P283 1151 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 POMT2Q9UKY4 750 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 VWA7Q9Y334 891 aa17.73■□□□□ 0.43
LITAF-220ENST00000620789 GSAPA4D1B5 854 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 EFCAB7A8K855 629 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 CDRT15L2A8MXV6 281 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 C2orf74A8MZ97 194 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 PSIP1O75475 530 aaKnown RBP17.72■□□□□ 0.43
LITAF-220ENST00000620789 MPC1LP0DKB6 136 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 FGF3P11487 239 aaPredicted RBP17.72■□□□□ 0.43
LITAF-220ENST00000620789 FDXRP22570 491 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 MCM3P25205 808 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 PKLRP30613 574 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 BDKRB1P46663 353 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 RAB28P51157 221 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 KPNA2P52292 529 aaKnown RBP17.72■□□□□ 0.43
LITAF-220ENST00000620789 MAPK10P53779 464 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 LRRC8EQ6NSJ5 796 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 CLEC14AQ86T13 490 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 PROSER1Q86XN7 944 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 FAM129CQ86XR2 697 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 CARFQ8N187 725 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 BMPERQ8N8U9 685 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 MAGEC3Q8TD91 643 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 FBF1Q8TES7 1133 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 KLHL6Q8WZ60 621 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 UBXN4Q92575 508 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 MAP3K3Q99759 626 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 RHOJQ9H4E5 214 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 TXNDC16Q9P2K2 825 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 CIDEBQ9UHD4 219 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 PCDHGA7Q9Y5G6 932 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 DMXL2Q8TDJ6 3036 aa17.72■□□□□ 0.43
LITAF-220ENST00000620789 IGHV5-51A0A0C4DH38 117 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 FAM95CA0A1B0GW59 222 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 PIPSLA2A3N6 862 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 B4E171 279 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 CHRM5P08912 532 aaPredicted RBP17.71■□□□□ 0.43
LITAF-220ENST00000620789 TSPAN7P41732 249 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms