RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 WRAP73Q9P2S5 460 aaPredicted RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 RBPJLQ9UBG7 517 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CKLFQ9UBR5 152 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 IRAK3Q9Y616 596 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 H3BNH8 94 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 VILLO15195 856 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SMIM6P0DI80 62 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 RAP2AP10114 183 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 ACSL1P33121 698 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 PRKAG1P54619 331 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 LILRA4P59901 499 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 RUNX2Q13950 521 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 HKDC1Q2TB90 917 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 KLHL22Q53GT1 634 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SNX20Q7Z614 316 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 FAR1Q8WVX9 515 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 FRMD6Q96NE9 622 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 ZNF304Q9HCX3 659 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 NUDT4Q9NZJ9 180 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 VPS29Q9UBQ0 182 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 HCN4Q9Y3Q4 1203 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 RGS20O76081 388 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CXCL14O95715 111 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 AGR2O95994 175 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 GJB1P08034 283 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CCR10P46092 362 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 GBX2P52951 348 aaPredicted RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 CAPSQ13938 189 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SLC9B1Q4ZJI4 515 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 LDLRAP1Q5SW96 308 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 C9orf64Q5T6V5 341 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 TMEM164Q5U3C3 297 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 DENND5AQ6IQ26 1287 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CHST15Q7LFX5 561 aaPredicted RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 ZNF781Q8N8C0 355 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 C2orf15Q8WU43 125 aaKnown RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 CCDC106Q9BWC9 280 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 LRRC3Q9BY71 257 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 KCNN2Q9H2S1 579 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 INTS7Q9NVH2 962 aaKnown RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 DTLQ9NZJ0 730 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CALML5Q9NZT1 146 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 N6AMT1Q9Y5N5 214 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 WWP2O00308 870 aa3□□□□□ -1.93
LPP-221ENST00000618621 PITPNM1O00562 1244 aa3□□□□□ -1.93
LPP-221ENST00000618621 IFNA7P01567 189 aa3□□□□□ -1.93
LPP-221ENST00000618621 ITIH1P19827 911 aa3□□□□□ -1.93
LPP-221ENST00000618621 NR4A1P22736 598 aa3□□□□□ -1.93
LPP-221ENST00000618621 CTSKP43235 329 aa3□□□□□ -1.93
LPP-221ENST00000618621 ARHGDIBP52566 201 aa3□□□□□ -1.93
LPP-221ENST00000618621 PHC1P78364 1004 aa3□□□□□ -1.93
LPP-221ENST00000618621 LARS2Q15031 903 aaKnown RBP3□□□□□ -1.93
LPP-221ENST00000618621 ZBTB46Q86UZ6 589 aa3□□□□□ -1.93
LPP-221ENST00000618621 FSTL5Q8N475 847 aaPredicted RBP3□□□□□ -1.93
LPP-221ENST00000618621 CANT1Q8WVQ1 401 aa3□□□□□ -1.93
LPP-221ENST00000618621 ZFP14Q9HCL3 533 aa3□□□□□ -1.93
LPP-221ENST00000618621 SCML2Q9UQR0 700 aa3□□□□□ -1.93
LPP-221ENST00000618621 AP3D1O14617 1153 aa3□□□□□ -1.93
LPP-221ENST00000618621 KCNE1P15382 129 aa3□□□□□ -1.93
LPP-221ENST00000618621 ENGP17813 658 aa3□□□□□ -1.93
LPP-221ENST00000618621 TSPAN8P19075 237 aa3□□□□□ -1.93
LPP-221ENST00000618621 BUD31P41223 144 aaPredicted RBP3□□□□□ -1.93
LPP-221ENST00000618621 NDUFV1P49821 464 aa3□□□□□ -1.93
LPP-221ENST00000618621 ZNF311Q5JNZ3 666 aa3□□□□□ -1.93
LPP-221ENST00000618621 NIPAL1Q6NVV3 410 aa3□□□□□ -1.93
LPP-221ENST00000618621 DEF8Q6ZN54 512 aa3□□□□□ -1.93
LPP-221ENST00000618621 FAM20CQ8IXL6 584 aa3□□□□□ -1.93
LPP-221ENST00000618621 ZNF420Q8TAQ5 688 aaPredicted RBP3□□□□□ -1.93
LPP-221ENST00000618621 RBM18Q96H35 190 aaKnown RBP3□□□□□ -1.93
LPP-221ENST00000618621 UCN2Q96RP3 112 aa3□□□□□ -1.93
LPP-221ENST00000618621 CIB1Q99828 191 aa3□□□□□ -1.93
LPP-221ENST00000618621 CDADC1Q9BWV3 514 aa3□□□□□ -1.93
LPP-221ENST00000618621 TPK1Q9H3S4 243 aa3□□□□□ -1.93
LPP-221ENST00000618621 RASSF1Q9NS23 344 aa3□□□□□ -1.93
LPP-221ENST00000618621 TAS2R7Q9NYW3 318 aa3□□□□□ -1.93
LPP-221ENST00000618621 ABCA4P78363 2273 aa3□□□□□ -1.93
LPP-221ENST00000618621 DCCP43146 1447 aa3□□□□□ -1.93
LPP-221ENST00000618621 CENPBD1B2RD01 187 aa3□□□□□ -1.93
LPP-221ENST00000618621 FADS2O95864 444 aaKnown RBP3□□□□□ -1.93
LPP-221ENST00000618621 PNLIPRP1P54315 467 aa3□□□□□ -1.93
LPP-221ENST00000618621 PITPNAQ00169 270 aa3□□□□□ -1.93
LPP-221ENST00000618621 SLC24A5Q71RS6 500 aa3□□□□□ -1.93
LPP-221ENST00000618621 GALNT5Q7Z7M9 940 aa3□□□□□ -1.93
LPP-221ENST00000618621 CFAP206Q8IYR0 622 aa3□□□□□ -1.93
LPP-221ENST00000618621 CRYBG2Q8N1P7 616 aa3□□□□□ -1.93
LPP-221ENST00000618621 SLC35F5Q8WV83 523 aa3□□□□□ -1.93
LPP-221ENST00000618621 XAGE5Q8WWM1 108 aa3□□□□□ -1.93
LPP-221ENST00000618621 UFD1Q92890 307 aa3□□□□□ -1.93
LPP-221ENST00000618621 IL1RAPQ9NPH3 570 aa3□□□□□ -1.93
LPP-221ENST00000618621 TMEM39AQ9NV64 488 aa3□□□□□ -1.93
LPP-221ENST00000618621 DNAJC11Q9NVH1 559 aa3□□□□□ -1.93
LPP-221ENST00000618621 XPR1Q9UBH6 696 aa3□□□□□ -1.93
LPP-221ENST00000618621 RIMKLBQ9ULI2 386 aa3□□□□□ -1.93
LPP-221ENST00000618621 CLTCQ00610 1675 aaKnown RBP3□□□□□ -1.93
LPP-221ENST00000618621 INHAP05111 366 aa3□□□□□ -1.93
LPP-221ENST00000618621 PRPS1L1P21108 318 aa3□□□□□ -1.93
LPP-221ENST00000618621 RPIAP49247 311 aa3□□□□□ -1.93
LPP-221ENST00000618621 MLLT6P55198 1093 aaPredicted RBP3□□□□□ -1.93
LPP-221ENST00000618621 MED22Q15528 200 aa3□□□□□ -1.93
LPP-221ENST00000618621 TMEM44Q2T9K0 475 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms