RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.82
PCSK6-217ENST00000618548 COL1A2P08123 1366 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 DYRK3O43781 588 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 EEDO75530 441 aaKnown RBP20.14■□□□□ 0.81
PCSK6-217ENST00000618548 CLDN9O95484 217 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 DGKEP52429 567 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 KLHL12Q53G59 568 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 BEX2Q9BXY8 128 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 NECTIN3Q9NQS3 549 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 MALT1Q9UDY8 824 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 DDX60Q8IY21 1712 aaKnown RBP20.14■□□□□ 0.81
PCSK6-217ENST00000618548 IGKV6D-21A0A0A0MT36 114 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 LCHNA4D1U4 455 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 FFAR2O15552 330 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 ERN1O75460 977 aaKnown RBP20.14■□□□□ 0.81
PCSK6-217ENST00000618548 DNAJB5O75953 348 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 TRBC1P01850 177 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 OR56A5P0C7T3 313 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 CRHBPP24387 322 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 CRYBB1P53674 252 aaPredicted RBP20.14■□□□□ 0.81
PCSK6-217ENST00000618548 UBE2UQ5VVX9 321 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 ERICH5Q6P6B1 374 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 SYCE2Q6PIF2 218 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 NFKBIZQ9BYH8 718 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 SPEF1Q9Y4P9 236 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 PPP2R3BQ9Y5P8 575 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 KIAA1551Q9HCM1 1747 aa20.14■□□□□ 0.81
PCSK6-217ENST00000618548 PTPN5P54829 565 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 SMU1Q2TAY7 513 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 XKR6Q5GH73 641 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 DENND1CQ8IV53 801 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 PTERQ96BW5 349 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 TCF25Q9BQ70 676 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 TINF2Q9BSI4 451 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 DUS2Q9NX74 493 aaKnown RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 ENPP5Q9UJA9 477 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 PRKAR1AP10644 381 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 CSNK2BP67870 215 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 CREB5Q02930 508 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 EMX2Q04743 252 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 RAPSNQ13702 412 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 RBFAQ8N0V3 343 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 OR13F1Q8NGS4 319 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 RBM38Q9H0Z9 239 aaKnown RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 CRTAC1Q9NQ79 661 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 KDM4FA0A1W2PPD8 638 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 FABP12A6NFH5 140 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 NPPAP01160 153 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 HTR7P34969 479 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 STC1P52823 247 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 RPS7P62081 194 aaKnown RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 PARP15Q460N3 678 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.13■□□□□ 0.817e-6■□□□□ 9.5
PCSK6-217ENST00000618548 SPNS2Q8IVW8 549 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 GTF3C2Q8WUA4 911 aaPredicted RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 TRNT1Q96Q11 434 aaKnown RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 ATG10Q9H0Y0 220 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 TIGARQ9NQ88 270 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 KLHL1Q9NR64 748 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 CASKO14936 926 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 WBP4O75554 376 aaKnown RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 TBX18O95935 607 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 CSF2P04141 144 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 NR2F6P10588 404 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 MSANTD2Q6P1R3 559 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 LRRC17Q8N6Y2 441 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 ALPK1Q96QP1 1244 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 GMLQ99445 158 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 LSM7Q9UK45 103 aaKnown RBP20.13■□□□□ 0.81
PCSK6-217ENST00000618548 VPS4AQ9UN37 437 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 PRELID1Q9Y255 219 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 B3GNT3Q9Y2A9 372 aa20.13■□□□□ 0.81
PCSK6-217ENST00000618548 COL14A1Q05707 1796 aaKnown RBP20.12■□□□□ 0.81
PCSK6-217ENST00000618548 ISPDA4D126 451 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 MMP3P08254 477 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 RPL9P32969 192 aaKnown RBP20.12■□□□□ 0.81
PCSK6-217ENST00000618548 TUFMP49411 452 aaKnown RBP20.12■□□□□ 0.81
PCSK6-217ENST00000618548 FPGSQ05932 587 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 GALNT1Q10472 559 aaPredicted RBP20.12■□□□□ 0.81
PCSK6-217ENST00000618548 GPRIN1Q7Z2K8 1008 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 ATAD1Q8NBU5 361 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 ZNF599Q96NL3 588 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 MKLN1Q9UL63 735 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 PCDHGA11Q9Y5H2 935 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 IGKV6-21A0A0C4DH24 114 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 SMIM35A0A1B0GVV1 85 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 A0A1W2PQ67 120 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 MAGEB17A8MXT2 336 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 CLIC1O00299 241 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 KPNA5O15131 536 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 HPRP00739 348 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 POLR2EP19388 210 aaKnown RBP20.12■□□□□ 0.81
PCSK6-217ENST00000618548 FPR1P21462 350 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 YBEYP58557 167 aaPredicted RBP20.12■□□□□ 0.81
PCSK6-217ENST00000618548 GSTM4Q03013 218 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 KIAA1614Q5VZ46 1190 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 RETSATQ6NUM9 610 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 LINGO4Q6UY18 593 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 OR52B6Q8NGF0 335 aa20.12■□□□□ 0.81
PCSK6-217ENST00000618548 SLC38A4Q969I6 547 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms