RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PTGIRP43119 386 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 PREPP48147 710 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 CD151P48509 253 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 CACNG1Q06432 222 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 LCN10Q6JVE6 187 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 PIANPQ8IYJ0 282 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 EFCAB3Q8N7B9 438 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 OR1L3Q8NH93 324 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 CLIP3Q96DZ5 547 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 SGSM3Q96HU1 749 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 FERD3LQ96RJ6 166 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 NLNQ9BYT8 704 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 TFB2MQ9H5Q4 396 aaKnown RBP18.37■□□□□ 0.53
CDX1-202ENST00000616154 VPS37BQ9H9H4 285 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 RAB6BQ9NRW1 208 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 PCMTD2Q9NV79 361 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 HEATR9A2RTY3 570 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 TTLL8A6PVC2 850 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 TMEM150CB9EJG8 249 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 IFRD1O00458 451 aaPredicted RBP18.36■□□□□ 0.53
CDX1-202ENST00000616154 BTN3A3O00478 584 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 BTN3A1O00481 513 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 CEACAM4O75871 244 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 CAPN1P07384 714 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 GSTM1P09488 218 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 ETS1P14921 441 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 ST6GAL1P15907 406 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 PRDX3P30048 256 aaKnown RBP18.36■□□□□ 0.53
CDX1-202ENST00000616154 RPL22P35268 128 aaKnown RBP18.36■□□□□ 0.53
CDX1-202ENST00000616154 CCL11P51671 97 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 GSTM4Q03013 218 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 SNX1Q13596 522 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 FAM198BQ6UWH4 519 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 PACS1Q6VY07 963 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 ZNF572Q7Z3I7 529 aaPredicted RBP18.36■□□□□ 0.53
CDX1-202ENST00000616154 SERPINA9Q86WD7 417 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 CCDC89Q8N998 374 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 GALNT11Q8NCW6 608 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 OR13J1Q8NGT2 312 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 CPT1CQ8TCG5 803 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 ZNF592Q92610 1267 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 MS4A14Q96JA4 679 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 MVB12BQ9H7P6 319 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 ACTR5Q9H9F9 607 aaPredicted RBP18.36■□□□□ 0.53
CDX1-202ENST00000616154 HOMER3Q9NSC5 361 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 PIH1D1Q9NWS0 290 aaKnown RBP18.36■□□□□ 0.53
CDX1-202ENST00000616154 TCFL5Q9UL49 500 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 PCDHGB7Q9Y5F8 929 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 MRFAP1Q9Y605 127 aa18.36■□□□□ 0.53
CDX1-202ENST00000616154 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
CDX1-202ENST00000616154 MAP3K7O43318 606 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 VPS4BO75351 444 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 SORBS2O94875 1100 aaKnown RBP18.35■□□□□ 0.53
CDX1-202ENST00000616154 AP2A2O94973 939 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 CYP2A7P20853 494 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 FOXN2P32314 431 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 GRIA1P42261 906 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 CDKN1CP49918 316 aaPredicted RBP18.35■□□□□ 0.53
CDX1-202ENST00000616154 RPA4Q13156 261 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 ITIH4Q14624 930 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 DBN1Q16643 649 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 NADK2Q4G0N4 442 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 PRUNE1Q86TP1 453 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 SYTL1Q8IYJ3 562 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 TAB3Q8N5C8 712 aaPredicted RBP18.35■□□□□ 0.53
CDX1-202ENST00000616154 PRELID2Q8N945 189 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 DNAAF3Q8N9W5 541 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 OR52E1Q8NGJ3 308 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 TRAPPC9Q96Q05 1148 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 VPS4AQ9UN37 437 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 ZNF451Q9Y4E5 1061 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 ESPL1Q14674 2120 aa18.35■□□□□ 0.53
CDX1-202ENST00000616154 BLACEA4D250 179 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 E7EVH7 732 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 URI1O94763 535 aaPredicted RBP18.34■□□□□ 0.53
CDX1-202ENST00000616154 TMEM63AO94886 807 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 GAS8O95995 478 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 APRTP07741 180 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 ZSCAN5DPP0CG00 497 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 ADRA1DP25100 572 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 UQCRFS1P47985 274 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 BOP1Q14137 746 aaKnown RBP18.34■□□□□ 0.53
CDX1-202ENST00000616154 WHAMMP3Q1A5X7 153 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 ZRANB3Q5FWF4 1079 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 TSTD2Q5T7W7 516 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 ZNF449Q6P9G9 518 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 NLRP9Q7RTR0 991 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 AMIGO1Q86WK6 493 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 NAP1L3Q99457 506 aaPredicted RBP18.34■□□□□ 0.53
CDX1-202ENST00000616154 NRTNQ99748 197 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 DPH2Q9BQC3 489 aaPredicted RBP18.34■□□□□ 0.53
CDX1-202ENST00000616154 L2HGDHQ9H9P8 463 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 SERTAD3Q9UJW9 196 aa18.34■□□□□ 0.53
CDX1-202ENST00000616154 SNRNP200O75643 2136 aaKnown RBP18.34■□□□□ 0.53
CDX1-202ENST00000616154 C2orf74A8MZ97 194 aa18.33■□□□□ 0.53
CDX1-202ENST00000616154 PRSS56P0CW18 603 aa18.33■□□□□ 0.53
CDX1-202ENST00000616154 PDHA2P29803 388 aa18.33■□□□□ 0.53
CDX1-202ENST00000616154 NSG1P42857 185 aa18.33■□□□□ 0.53
CDX1-202ENST00000616154 LMAN1P49257 510 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms