RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
AL109954.3-201ENST00000615088 TTC7AQ9ULT0 858 aaPredicted RBP12.34□□□□□ -0.43
AL109954.3-201ENST00000615088 FARSAQ9Y285 508 aaKnown RBP12.34□□□□□ -0.43
AL109954.3-201ENST00000615088 MAN2B2Q9Y2E5 1009 aa12.34□□□□□ -0.43
AL109954.3-201ENST00000615088 KCNMB2Q9Y691 235 aa12.34□□□□□ -0.43
AL109954.3-201ENST00000615088 A0A0J9YY10 115 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 ISM1B1AKI9 464 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 E7EQ34 232 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 MKRN2OSH3BPM6 223 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 MEN1O00255 615 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 KPNA5O15131 536 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 SUV39H1O43463 412 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 UGT2B7P16662 529 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 MGAT1P26572 445 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 VPS41P49754 854 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 ABRQ12979 859 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 GPS2Q13227 327 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 KIR2DS3Q14952 304 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 UGT8Q16880 541 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 MRNIPQ6NTE8 343 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 TTC23LQ6PF05 361 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 SDCCAG8Q86SQ7 713 aaPredicted RBP12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 PTRH1Q86Y79 214 aaKnown RBP12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 DCUN1D3Q8IWE4 304 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 DSELQ8IZU8 1212 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 PRELID2Q8N945 189 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 CFAP61Q8NHU2 1237 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 ABHD17AQ96GS6 310 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 TCTN2Q96GX1 697 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 PBKQ96KB5 322 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 NRTNQ99748 197 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 CHST8Q9H2A9 424 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 TREX1Q9NSU2 369 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 JRKLQ9Y4A0 524 aa12.33□□□□□ -0.44
AL109954.3-201ENST00000615088 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 IQCF5A8MTL0 148 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 GPC4O75487 556 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 RFPL1O75677 317 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 KRT14P02533 472 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 RAB40ALP0C0E4 278 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 PAMP19021 973 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 AGXTP21549 392 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 RPS3P23396 243 aaKnown RBP eCLIP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 AOAHP28039 575 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 NMBRP28336 390 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 RAB28P51157 221 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 TERF1P54274 439 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 GPS1Q13098 491 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SLC5A12Q1EHB4 618 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 LACTB2Q53H82 288 aaPredicted RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 PLEKHS1Q5SXH7 462 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 RNF187Q5TA31 235 aaPredicted RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 IZUMO3Q5VZ72 239 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 ARMC3Q5W041 872 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 CASC4Q6P4E1 433 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 UNC5DQ6UXZ4 953 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 CDHR3Q6ZTQ4 885 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 RAB42Q8N4Z0 105 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 LKAAEAR1Q8TD35 194 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SKA2Q8WVK7 121 aaPredicted RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 MAGOHBQ96A72 148 aaKnown RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SLC22A18Q96BI1 424 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 FOPNLQ96NB1 174 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 OR2A14Q96R47 310 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 KIFC1Q9BW19 673 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 AKIRIN1Q9H9L7 192 aaPredicted RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 IRAK4Q9NWZ3 460 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SYBUQ9NX95 663 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SPHK1Q9NYA1 384 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SAMD15Q9P1V8 674 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 ANAPC2Q9UJX6 822 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SOX13Q9UN79 622 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 SNX7Q9UNH6 387 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 MRFAP1Q9Y605 127 aa12.32□□□□□ -0.44
AL109954.3-201ENST00000615088 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 LOC400499M0QZD8 3231 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 C9J4A7 227 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 ZNF749O43361 778 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 OR2B3O76000 313 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 VAPBO95292 243 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 WISP1O95388 367 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 FURINP09958 794 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 PKLRP30613 574 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 RORAP35398 523 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 PMS2P54278 862 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 EIF3BP55884 814 aaKnown RBP12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 RPS18P62269 152 aaKnown RBP12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 KCNC4Q03721 635 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 KYNUQ16719 465 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
AL109954.3-201ENST00000615088 OTOAQ7RTW8 1153 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms