RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 GSTM4Q03013 218 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 OVGP1Q12889 678 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 ABRQ12979 859 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 C1orf61Q13536 156 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 SEPT7Q16181 437 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 FAM83EQ2M2I3 478 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 ZXDCQ2QGD7 858 aaPredicted RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 TTLL9Q3SXZ7 439 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 CCDC153Q494R4 210 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 FBXO48Q5FWF7 155 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 HHATQ5VTY9 493 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 FAM219BQ5XKK7 198 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 METRNLQ641Q3 311 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 CAPRIN2Q6IMN6 1127 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 ZYG11AQ6WRX3 759 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 ATG14Q6ZNE5 492 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 NEK10Q6ZWH5 1172 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 RPS27LQ71UM5 84 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 PDZD3Q86UT5 571 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 PARGQ86W56 976 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 C10orf107Q8IVU9 208 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 MYO1HQ8N1T3 1032 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 KDF1Q8NAX2 398 aaPredicted RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 RHEBL1Q8TAI7 183 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 FAM174AQ8TBP5 190 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 SAP25Q8TEE9 199 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 TMEM159Q96B96 161 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 MRPL57Q9BQC6 102 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 LRRC61Q9BV99 259 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 MRPL46Q9H2W6 279 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 OSGEPL1Q9H4B0 414 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 PRDM8Q9NQV8 689 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 UTP6Q9NYH9 597 aaKnown RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 OGFRQ9NZT2 677 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 COPG2Q9UBF2 871 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 CIDEBQ9UHD4 219 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 PDE10AQ9Y233 779 aa7.84□□□□□ -1.15
PCDH9-205ENST00000614931 COL5A1P20908 1838 aaPredicted RBP7.84□□□□□ -1.15
PCDH9-205ENST00000614931 GOLGA4Q13439 2230 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TMEM8BA6NDV4 472 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 NCF1BA6NI72 391 aaPredicted RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 A8MT66 165 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 NCF1CA8MVU1 366 aaPredicted RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 SUPT3HB4E1H0 165 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 F8W8V4 182 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 GFYI3L273 518 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TNFSF14O43557 240 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 PSIP1O75475 530 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 SUPT3HO75486 399 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TNFP01375 233 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CSF2P04141 144 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TPBGLP0DKB5 382 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 NCF1P14598 390 aaPredicted RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CPA3P15088 417 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 NME1P15531 152 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 BGNP21810 368 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 RPL10P27635 214 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ARRB2P32121 409 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 MDH1P40925 334 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ACTR1BP42025 376 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CCR10P46092 362 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ARRB1P49407 418 aaPredicted RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 AGTR2P50052 363 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CLCNKAP51800 687 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ACTR1AP61163 376 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 IL9RQ01113 521 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 RPA4Q13156 261 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 PTK2BQ14289 1009 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 GRB7Q14451 532 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CLCA4Q14CN2 919 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 INAVAQ3KP66 663 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 KLC3Q6P597 504 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 SLC30A9Q6PML9 568 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ZCCHC23Q6ZST2 131 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 UBE2R2Q712K3 238 aaPredicted RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 KANSL1Q7Z3B3 1105 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ADAMTSL2Q86TH1 951 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 LCA5Q86VQ0 697 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 DCP2Q8IU60 420 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ARFGAP2Q8N6H7 521 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 LMNTD1Q8N9Z9 388 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 OR5AR1Q8NGP9 310 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CFAP61Q8NHU2 1237 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 GPBAR1Q8TDU6 330 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CKAP2Q8WWK9 683 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 PATE1Q8WXA2 126 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ASB11Q8WXH4 323 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TSNARE1Q96NA8 513 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 INSM2Q96T92 566 aaPredicted RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 PAIP2Q9BPZ3 127 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TMEM79Q9BSE2 394 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 IQCGQ9H095 443 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 DPEP2Q9H4A9 486 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CNOT10Q9H9A5 744 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 INTS9Q9NV88 658 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TRNAU1APQ9NX07 287 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 DNAJC28Q9NX36 388 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 NKIRAS1Q9NYS0 192 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms