RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SRP54P61011 504 aaKnown RBP14.46□□□□□ -0.09
SNPH-203ENST00000614659 LGALS3BPQ08380 585 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 MACC1Q6ZN28 852 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 ZZZ3Q8IYH5 903 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 COX4I2Q96KJ9 171 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 RANBP9Q96S59 729 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 BTBD1Q9H0C5 482 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 WDR6Q9NNW5 1121 aaKnown RBP14.46□□□□□ -0.09
SNPH-203ENST00000614659 WBP11Q9Y2W2 641 aaKnown RBP14.46□□□□□ -0.09
SNPH-203ENST00000614659 HS3ST4Q9Y661 456 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 RFPL1O75677 317 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 BCAS2O75934 225 aaPredicted RBP14.46□□□□□ -0.09
SNPH-203ENST00000614659 DUSP3P51452 185 aaPredicted RBP14.46□□□□□ -0.09
SNPH-203ENST00000614659 PDCD4Q53EL6 469 aaKnown RBP14.46□□□□□ -0.09
SNPH-203ENST00000614659 PYDC2Q56P42 97 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 CMPK2Q5EBM0 449 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 B3GNT9Q6UX72 402 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 FAM220AQ7Z4H9 259 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 SLC22A18Q96BI1 424 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 LPIN3Q9BQK8 851 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 PDLIM7Q9NR12 457 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 GALNT8Q9NY28 637 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 CALML5Q9NZT1 146 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 TMED5Q9Y3A6 229 aa14.46□□□□□ -0.09
SNPH-203ENST00000614659 GALTP07902 379 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 FOSL2P15408 326 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 BMP7P18075 431 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 ADGRG6Q86SQ4 1221 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 LRRC17Q8N6Y2 441 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 MINDY2Q8NBR6 621 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 MCFD2Q8NI22 146 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 PCDHGC4Q9Y5F7 938 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 ARL5AQ9Y689 179 aa14.46□□□□□ -0.1
SNPH-203ENST00000614659 FADS2P1A8MWK0 482 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 CLDN4O14493 209 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 HIST1H2ABP04908 130 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 HIST3H2AQ7L7L0 130 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SCAIQ8N9R8 606 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 HMGB4Q8WW32 186 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 PIH1D2Q8WWB5 315 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 EZH1Q92800 747 aaPredicted RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 HIST1H2ACQ93077 130 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 NODALQ96S42 347 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 CXorf21Q9HAI6 301 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 CCDC177Q9NQR7 707 aaPredicted RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 THUMPD1Q9NXG2 353 aaKnown RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 PTBP2Q9UKA9 531 aaKnown RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 BACE2Q9Y5Z0 518 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 MATN2O00339 956 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 TNFP01375 233 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 AHSGP02765 367 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 IFNW1P05000 195 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 ZNF24P17028 368 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 MYL9P24844 172 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 TMPRSS11BQ86T26 416 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 LRRC58Q96CX6 371 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 C16orf70Q9BSU1 422 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 PPEF2O14830 753 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 PIM1P11309 404 aaPredicted RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 BMPR1AP36894 532 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SCAPQ12770 1279 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 MERTKQ12866 999 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SERINC3Q13530 473 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 NDUFAF6Q330K2 333 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 PDSS2Q86YH6 399 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SCAMP5Q8TAC9 235 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 CDKN2AIPNLQ96HQ2 116 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 KLHL32Q96NJ5 620 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 CCDC106Q9BWC9 280 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 FGF3P11487 239 aaPredicted RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 CTSKP43235 329 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 PRKAG1P54619 331 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 RAB25P57735 213 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 TUBA4AP68366 448 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 CHIT1Q13231 466 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SF1Q15637 639 aaKnown RBP14.45□□□□□ -0.1
SNPH-203ENST00000614659 CNPY1Q3B7I2 92 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 IZUMO1Q8IYV9 350 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 NRSN1Q8IZ57 195 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 ZNF671Q8TAW3 534 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SMOQ99835 787 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 SYT11Q9BT88 431 aa14.45□□□□□ -0.1
SNPH-203ENST00000614659 ECI2O75521 394 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 OR6B1O95007 311 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 CHRNA4P43681 627 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 DEF8Q6ZN54 512 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 OR6K2Q8NGY2 324 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 NUS1Q96E22 293 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
SNPH-203ENST00000614659 OR52B2Q96RD2 323 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 FBRSQ9HAH7 460 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 ZDHHC3Q9NYG2 299 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 ACTR3BQ9P1U1 418 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 MYH1P12882 1939 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 FFAR2O15552 330 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 IFNGP01579 166 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 DAG1Q14118 895 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 TMEM44Q2T9K0 475 aa14.44□□□□□ -0.1
SNPH-203ENST00000614659 FBXL22Q6P050 247 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms