RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OSGIN1Q9UJX0 560 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 FAM92AA1XBS5 289 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 A8MU76 341 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 AZIN1O14977 448 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 GUCY1B2O75343 617 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TBX18O95935 607 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 MT-CO1P00395 513 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 KRT8P05787 483 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 CHRNB1P11230 501 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 LTBRP36941 435 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 PPP2R2BQ00005 443 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 ZC3H12BQ5HYM0 836 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 ZNF691Q5VV52 312 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 GLYATQ6IB77 296 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 LAIR2Q6ISS4 152 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TMEM184AQ6ZMB5 413 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 PHF21BQ96EK2 531 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TRMT2BQ96GJ1 504 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 REXO5Q96IC2 774 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 CEP295NLQ96MC4 621 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 UGT2B28Q9BY64 529 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 CCSER2Q9H7U1 834 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 ABCC13Q9NSE7 274 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TREX1Q9NSU2 369 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 DZANK1Q9NVP4 752 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 COMMD8Q9NX08 183 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 DDIT4Q9NX09 232 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 C3orf18Q9UK00 162 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 INTS6Q9UL03 887 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 F11P03951 625 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TCF3P15923 654 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 CHRM3P20309 590 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 NR4A2P43354 598 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TUBA1BP68363 451 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 MAPK11Q15759 364 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 SMUG1Q53HV7 270 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TUBA1AQ71U36 451 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 PSMA8Q8TAA3 256 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 ATXN3LQ9H3M9 355 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 MARCH7Q9H992 704 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 POLE4Q9NR33 117 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 TLR8Q9NR97 1041 aaKnown RBP21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 ANGPTL3Q9Y5C1 460 aa21.51■■□□□ 1.03
POLR2J3-220ENST00000613744 C2orf78A6NCI8 922 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 PIP5K1BO14986 540 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 SLC16A6O15403 523 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 KCNK2O95069 426 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 CXCR2P25025 360 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 TPI1P60174 286 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 GRB7Q14451 532 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 ESRP1Q6NXG1 681 aaKnown RBP21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 CLIP4Q8N3C7 705 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 AMBRA1Q9C0C7 1298 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 CCDC177Q9NQR7 707 aaPredicted RBP21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 PIGVQ9NUD9 493 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 TRPM5Q9NZQ8 1165 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 COL6A3P12111 3177 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 C2orf16Q68DN1 1984 aa21.5■■□□□ 1.03
POLR2J3-220ENST00000613744 ZNF840PA6NDX5 716 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 SYCE1LA8MT33 242 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 H3BQ06 376 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 EIF3FO00303 357 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ANXA9O76027 345 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 WISP3O95389 354 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ANXA6P08133 673 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 HOXB6P17509 224 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 UGT2B10P36537 528 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 MTHFRP42898 656 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 PLK1P53350 603 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 FAM209AQ5JX71 171 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 TXNDC8Q6A555 127 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 RPS27LQ71UM5 84 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 RTL10Q7L3V2 364 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 TAC4Q86UU9 113 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 POC5Q8NA72 575 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ING5Q8WYH8 240 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ISG20Q96AZ6 181 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 MED30Q96HR3 178 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 TRIM62Q9BVG3 475 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 UXTQ9UBK9 157 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 TPRKBQ9Y3C4 175 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 LOC100130705A0A1B0GUX0 176 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 H0Y626 953 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 CDK14O94921 469 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 TRIM16O95361 564 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 DLGAP3O95886 979 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 MT-ND1P03886 318 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 HGFP14210 728 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 JUNDP17535 347 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ADRA1BP35368 520 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ST13P50502 369 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 CXCR4P61073 352 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 YBX1P67809 324 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 SULT1C3Q6IMI6 304 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 PAGE2Q7Z2X7 111 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 RAB44Q7Z6P3 723 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 HID1Q8IV36 788 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 ITFG1Q8TB96 612 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms