RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 LARP4Q71RC2 724 aaKnown RBP eCLIP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TSPAN33Q86UF1 283 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 SERPINA9Q86WD7 417 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 KIAA2013Q8IYS2 634 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 MUS81Q96NY9 551 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 C9orf16Q9BUW7 83 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ABCG8Q9H221 673 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 CCM2LQ9NUG4 571 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 SMPD3Q9NY59 655 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ASB1Q9Y576 335 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 AXIN1O15169 862 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 GUCY1B2O75343 617 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 GLUD1P00367 558 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SNRPB2P08579 225 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 LINC00032P0C843 101 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IL7RP16871 459 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IL10P22301 178 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 HLCSP50747 726 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SLC13A2Q13183 592 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 LRRC73Q5JTD7 316 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 INTS11Q5TA45 600 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CRTC3Q6UUV7 619 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 FRA10AC1Q70Z53 315 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SLC22A16Q86VW1 577 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ANKRD13BQ86YJ7 626 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CPXM2Q8N436 756 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 STON2Q8WXE9 905 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IL23AQ9NPF7 189 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 AGPAT4Q9NRZ5 378 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 NEDD8-MDP1E9PL57 170 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 GAPDHSO14556 408 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 INPP4BO15327 924 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 NRP2O60462 931 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 BCAS1O75363 584 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 RSL1D1O76021 490 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 KRT75O95678 551 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IGSF6O95976 241 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CYBBP04839 570 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 MAGP20916 626 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IFITM2Q01629 132 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 GRSF1Q12849 480 aaKnown RBP eCLIP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IMPG1Q17R60 797 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 AGAP7PQ5VUJ5 663 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 PTRHD1Q6GMV3 140 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 UGT3A1Q6NUS8 523 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 RAB2BQ8WUD1 216 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 KCNJ9Q92806 393 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 C17orf80Q9BSJ5 609 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CIPCQ9C0C6 399 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 TUBB1Q9H4B7 451 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ATP13A3Q9H7F0 1226 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 HMG20AQ9NP66 347 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 LTB4R2Q9NPC1 389 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 IL26Q9NPH9 171 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CD274Q9NZQ7 290 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 TMEM181Q9P2C4 612 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SYCE1LA8MT33 242 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 PRMT5O14744 637 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ACOX3O15254 700 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CRCPO75575 148 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ESR1P03372 595 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ALDOCP09972 364 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 HSPA1AP0DMV8 641 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 HSPA1BP0DMV9 641 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SRCP12931 536 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 NCK1P16333 377 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 NAT1P18440 290 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 PSMA4P25789 261 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 RPS9P46781 194 aaKnown RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 CLCN4P51793 760 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SQLEQ14534 574 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 TEAD2Q15562 447 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ATP6AP1Q15904 470 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 PAGE2BQ5JRK9 111 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ANKS6Q68DC2 871 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ASTLQ6HA08 431 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 SLCO6A1Q86UG4 719 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 GPSM1Q86YR5 675 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 P2RY12Q9H244 342 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 TP63Q9H3D4 680 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 MARCH7Q9H992 704 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 ARMC1Q9NVT9 282 aa16.15■□□□□ 0.18
CNOT3-208ENST00000613073 HECAQ9UBI9 543 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-208ENST00000613073 NME4O00746 187 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 CLCN7P51798 805 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 LCP2Q13094 533 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 GRB7Q14451 532 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 CYP51A1Q16850 503 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 CCNYL2Q5T2Q4 361 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 MPP7Q5T2T1 576 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 ZNF773Q6PK81 442 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 SCIMPQ6UWF3 145 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 ZNF641Q96N77 438 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 SEPHS2Q99611 448 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 PSD2Q9BQI7 771 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms