RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MARCKSL1P49006 195 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 DCDP81605 110 aaKnown RBP22.59■■□□□ 1.21
MMP28-203ENST00000612672 SARM1Q6SZW1 724 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 RANBP10Q6VN20 620 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 FAM20CQ8IXL6 584 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 GRHL3Q8TE85 626 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 GBA3Q9H227 469 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 MVB12BQ9H7P6 319 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 DDX56Q9NY93 547 aaKnown RBP22.59■■□□□ 1.21
MMP28-203ENST00000612672 NDOR1Q9UHB4 597 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 FBXL4Q9UKA2 621 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 ZSCAN9O15535 394 aaPredicted RBP22.58■■□□□ 1.21
MMP28-203ENST00000612672 TFDP2Q14188 446 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 NKAIN1Q4KMZ8 207 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 IGFL2Q6UWQ7 119 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 UNC5AQ6ZN44 842 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 SLC34A3Q8N130 599 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 PROKR1Q8TCW9 393 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 TFGQ92734 400 aaPredicted RBP22.58■■□□□ 1.21
MMP28-203ENST00000612672 PTERQ96BW5 349 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 COPS8Q99627 209 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 CHP1Q99653 195 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 MESP1Q9BRJ9 268 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 IFNKQ9P0W0 207 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 ENTPD4Q9Y227 616 aa22.58■■□□□ 1.21
MMP28-203ENST00000612672 MYO7BQ6PIF6 2116 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 hCG_1818297A0A087WSY0 165 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 CCDC78A2IDD5 438 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 C2orf81A6NN90 581 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 AGPSO00116 658 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 IFRD1O00458 451 aaPredicted RBP22.57■■□□□ 1.2
MMP28-203ENST00000612672 IPO13O94829 963 aaKnown RBP22.57■■□□□ 1.2
MMP28-203ENST00000612672 ITGA3P26006 1051 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 RBL1P28749 1068 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 CD151P48509 253 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 CYP2A13Q16696 494 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 DENND5AQ6IQ26 1287 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 CAVIN1Q6NZI2 390 aaKnown RBP22.57■■□□□ 1.2
MMP28-203ENST00000612672 BZW1Q7L1Q6 419 aaKnown RBP22.57■■□□□ 1.2
MMP28-203ENST00000612672 CLDN19Q8N6F1 224 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 PPP4R1Q8TF05 950 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 TM9SF4Q92544 642 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 IQCDQ96DY2 449 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 PHF12Q96QT6 1004 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 VAT1Q99536 393 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 C17orf62Q9BQA9 187 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 ATP13A2Q9NQ11 1180 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 PLAGL1Q9UM63 463 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 AP1M2Q9Y6Q5 423 aa22.57■■□□□ 1.2
MMP28-203ENST00000612672 SETD2Q9BYW2 2564 aaPredicted RBP22.56■■□□□ 1.2
MMP28-203ENST00000612672 SOCS6O14544 535 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 HNRNPRO43390 633 aaKnown RBP22.56■■□□□ 1.2
MMP28-203ENST00000612672 CHRM5P08912 532 aaPredicted RBP22.56■■□□□ 1.2
MMP28-203ENST00000612672 PSMB4P28070 264 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 GRNP28799 593 aaKnown RBP22.56■■□□□ 1.2
MMP28-203ENST00000612672 COX15Q7KZN9 410 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 SNX20Q7Z614 316 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 DNAJC22Q8N4W6 341 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 LMNTD1Q8N9Z9 388 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 P3H4Q92791 437 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 N4BP2L2Q92802 583 aaPredicted RBP22.56■■□□□ 1.2
MMP28-203ENST00000612672 ULK4Q96C45 1275 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 DNAJC7Q99615 494 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 AGPAT4Q9NRZ5 378 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 ZDHHC3Q9NYG2 299 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 KLHL20Q9Y2M5 609 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 PRSS21Q9Y6M0 314 aa22.56■■□□□ 1.2
MMP28-203ENST00000612672 TRBV5-4A0A0C4DH59 114 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 C5orf60A6NFR6 353 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 MAP3K7O43318 606 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 IGHEP01854 428 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 RALBP11234 206 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 MC4RP32245 332 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 TSFMP43897 325 aaKnown RBP22.55■■□□□ 1.2
MMP28-203ENST00000612672 GEMP55040 296 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 AIMP2Q13155 320 aaKnown RBP22.55■■□□□ 1.2
MMP28-203ENST00000612672 ODF2Q5BJF6 829 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 NAPRTQ6XQN6 538 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 SERPINA9Q86WD7 417 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.55■■□□□ 1.2
MMP28-203ENST00000612672 DNAJC1Q96KC8 554 aaKnown RBP22.55■■□□□ 1.2
MMP28-203ENST00000612672 AP1M1Q9BXS5 423 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 CHRNA10Q9GZZ6 450 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 HS3ST3B1Q9Y662 390 aa22.55■■□□□ 1.2
MMP28-203ENST00000612672 A0A0J9YY10 115 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 SPOPO43791 374 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 EDN3P14138 238 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 ITGALP20701 1170 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 ACRV1P26436 265 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 Q0VFX4 171 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 PRAMEF13Q5VWM6 474 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 SP5Q6BEB4 398 aaPredicted RBP22.54■■□□□ 1.2
MMP28-203ENST00000612672 RHOT2Q8IXI1 618 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 PIANPQ8IYJ0 282 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 DTWD1Q8N5C7 304 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 FAR1Q8WVX9 515 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.54■■□□□ 1.2
MMP28-203ENST00000612672 SPSB2Q99619 263 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 TXLNGQ9NUQ3 528 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 TRHDEQ9UKU6 1024 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms