RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SLC22A15Q8IZD6 547 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3Q8IZP1 549 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TP53I13Q8NBR0 393 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ASB12Q8WXK4 309 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 PTCD3Q96EY7 689 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 MRGPRX1Q96LB2 322 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 FOPNLQ96NB1 174 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF382Q96SR6 550 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 NUSAP1Q9BXS6 441 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TEX101Q9BY14 249 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CD244Q9BZW8 370 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 NOL11Q9H8H0 719 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 MBNL1Q9NR56 388 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 MRGBPQ9NV56 204 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ARL15Q9NXU5 204 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 OPTCQ9UBM4 332 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GULP1Q9UBP9 304 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 LNPEPQ9UIQ6 1025 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GPSM3Q9Y4H4 160 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ASB1Q9Y576 335 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 DNAJC15Q9Y5T4 150 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 EYSQ5T1H1 3165 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 A0A1B0GTL3 188 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 MGAT4DA6NG13 374 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 LOC730098B7Z3J9 87 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 GPR89AB7ZAQ6 455 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 K7EPI3 171 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CHUKO15111 745 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 SLC22A2O15244 555 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CCNT2O60583 730 aaKnown RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 PSIP1O75475 530 aaKnown RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 STK16O75716 305 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 POP7O75817 140 aaKnown RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CHEK2O96017 543 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 OTCP00480 354 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 GPR89BP0CG08 455 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 UROSP10746 265 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 MAP4P27816 1152 aaKnown RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 PTPN4P29074 926 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 PBLDP30039 288 aaPredicted RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ADSLP30566 484 aaPredicted RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 PIK3CGP48736 1102 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 FOXA1P55317 472 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ABRQ12979 859 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 INPP5AQ14642 412 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 IRF4Q15306 451 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 SYVN1Q86TM6 617 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TREML1Q86YW5 311 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF547Q8IVP9 402 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CFAP206Q8IYR0 622 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CHCHD4Q8N4Q1 142 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CPSF7Q8N684 471 aaKnown RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TEX9Q8N6V9 391 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 OR2L2Q8NH16 312 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 RNF217Q8TC41 542 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TWIST2Q8WVJ9 160 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ATP6V1E2Q96A05 226 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 SLC7A6OSQ96CW6 309 aaPredicted RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 C19orf60Q96EN9 201 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CCT7Q99832 543 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TMEM79Q9BSE2 394 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 OSBPL6Q9BZF3 934 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 LRMDAQ9H2I8 198 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 WDR26Q9H7D7 661 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 IPPKQ9H8X2 491 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 PFDN4Q9NQP4 134 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ARHGEF3Q9NR81 526 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 PHPT1Q9NRX4 125 aaPredicted RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 FAM8A1Q9UBU6 413 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TAGLN3Q9UI15 199 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF225Q9UK10 706 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 NDRG2Q9UN36 371 aaKnown RBP8.7□□□□□ -1.02
CCDC47-207ENST00000612558 DUSP12Q9UNI6 340 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TMEM98Q9Y2Y6 226 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 ANGPTL3Q9Y5C1 460 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 CAPN7Q9Y6W3 813 aa8.7□□□□□ -1.02
CCDC47-207ENST00000612558 TCRBV21S2A2A0A5A6 115 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KLHL33A6NCF5 533 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PRR23AA6NEV1 266 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 H0YHG0 523 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 MYO1CO00159 1063 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 OR7A17O14581 309 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 DCXO43602 365 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 VPS4BO75351 444 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KATNA1O75449 491 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CATP04040 527 aaKnown RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ENO1P06733 434 aaKnown RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 EPB42P16452 691 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PDHA2P29803 388 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PRDX6P30041 224 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PRDX3P30048 256 aaKnown RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 GDF5P43026 501 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PREPP48147 710 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 MNAT1P51948 309 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CCNG1P51959 295 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ERVPABLB-1P60509 514 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 DOK6Q6PKX4 331 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CRTC3Q6UUV7 619 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KIAA1324Q6UXG2 1013 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms