RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 AKT1P31749 480 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 NR1H2P55055 460 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 GRIK2Q13002 908 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 PWP1Q13610 501 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 INTS11Q5TA45 600 aaKnown RBP13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 GRAMD4Q6IC98 578 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 GCNT7Q6ZNI0 430 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 TPRG1Q6ZUI0 275 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 GALNT10Q86SR1 603 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 P2RY13Q9BPV8 354 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 CFHR5Q9BXR6 569 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 EBPLQ9BY08 206 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC22A14Q9Y267 594 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 FADS3Q9Y5Q0 445 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLOCKO15516 846 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SOCS5O75159 536 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 RASAL1O95294 804 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 LDLRP01130 860 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 BCKDHAP12694 445 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 HTR1EP28566 365 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 CDKN2CP42773 168 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 MAPK10P53779 464 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SNRPD1P62314 119 aaKnown RBP13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 MAPKAPK3Q16644 382 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC36A3Q495N2 470 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZNF697Q5TEC3 545 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SULT1C3Q6IMI6 304 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SPRED1Q7Z699 444 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 DPP10Q8N608 796 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 TSPEARQ8WU66 669 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SGCDQ92629 289 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 TRAV19A0A0A6YYK7 116 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 H0Y858 1186 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 H0YJX3 145 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 UPK1AO00322 258 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 RGS14O43566 566 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 NOBOXO60393 691 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 WDR47O94967 919 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 CXCL14O95715 111 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 LATS1O95835 1130 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 PGRP06401 933 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 ELK4P28324 431 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 NSG1P42857 185 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 RPS9P46781 194 aaKnown RBP13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 GNPDA1P46926 289 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 ERVFC1P60507 584 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC14A1Q13336 389 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 CBX2Q14781 532 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 TEAD2Q15562 447 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 PTCHD3Q3KNS1 767 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 CYBRD1Q53TN4 286 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 Q6ZVL8 140 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 HSD11B1LQ7Z5J1 315 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 ITFG1Q8TB96 612 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 APIPQ96GX9 242 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 C9orf16Q9BUW7 83 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 SMURF2Q9HAU4 748 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZDHHC3Q9NYG2 299 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 USP34Q70CQ2 3546 aa13.76□□□□□ -0.21
PCDHGA3-202ENST00000612467 FOXD2O60548 495 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 KCNH1O95259 989 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 GNRH1P01148 92 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 JAK1P23458 1154 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 ETV3P41162 512 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 CCSMST1Q4G0I0 132 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 MFSD2AQ8NA29 543 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 KREMEN2Q8NCW0 462 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR2T12Q8NG77 320 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 CDC26Q8NHZ8 85 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 TMBIM1Q969X1 311 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 PPP3R2Q96LZ3 170 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR52E6Q96RD3 313 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 EPB41L1Q9H4G0 881 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 PFDN4Q9NQP4 134 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 LIMD1Q9UGP4 676 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 EIF3LQ9Y262 564 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 TRIM43BA6NCK2 446 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 TTC34A8MYJ7 566 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 LAG3P18627 525 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 PRKACGP22612 351 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 MRPL19P49406 292 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC7A9P82251 487 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 CYP4F3Q08477 520 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 DDX39BQ13838 428 aaKnown RBP13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 LAPTM4AQ15012 233 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 PGS1Q32NB8 556 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 B3GNT6Q6ZMB0 384 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 STK32CQ86UX6 486 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZBTB46Q86UZ6 589 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 RIMKLAQ8IXN7 391 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 TRIM43Q96BQ3 446 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms