RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PTBP2Q9UKA9 531 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 TDRKHQ9Y2W6 561 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 TNPO3Q9Y5L0 923 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 DMDP11532 3685 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 OR52A4PA6NMU1 304 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 TNFRSF10AO00220 468 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 TAPBPO15533 448 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 EDF1O60869 148 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 RPN2P04844 631 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 TSPAN8P19075 237 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 ARRB2P32121 409 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 CNR2P34972 360 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 HALP42357 657 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 OCRLQ01968 901 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 PRKG2Q13237 762 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 C1orf61Q13536 156 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 CLCA4Q14CN2 919 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 TEAD4Q15561 434 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 PRRT3Q5FWE3 981 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 ARL13AQ5H913 290 aaPredicted RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 ANKS6Q68DC2 871 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 NRROSQ86YC3 692 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 MAGEC3Q8TD91 643 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 CNDP1Q96KN2 507 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 PKP4Q99569 1192 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 GSDMCQ9BYG8 508 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 NSRP1Q9H0G5 558 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 TMEM74BQ9NUR3 256 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 ASB1Q9Y576 335 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 SRRM3A6NNA2 597 aaPredicted RBP17.08■□□□□ 0.33
SREK1-216ENST00000612404 NPHS1O60500 1241 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CCNT2O60583 730 aaKnown RBP17.08■□□□□ 0.33
SREK1-216ENST00000612404 CSF2P04141 144 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CHRNGP07510 517 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CELA2BP08218 269 aaPredicted RBP17.08■□□□□ 0.33
SREK1-216ENST00000612404 HNMTP50135 292 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CDH13P55290 713 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.33
SREK1-216ENST00000612404 KRT33BQ14525 404 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CDKL4Q5MAI5 379 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 PRAMEF14Q5SWL7 426 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 FRMD7Q6ZUT3 714 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 TAF8Q7Z7C8 310 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CRLF3Q8IUI8 442 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 DCUN1D3Q8IWE4 304 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 TCAIMQ8N3R3 496 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 OR5K2Q8NHB8 316 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 GPBAR1Q8TDU6 330 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 NELL1Q92832 810 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 CCDC138Q96M89 665 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 NSUN5Q96P11 429 aaKnown RBP17.08■□□□□ 0.33
SREK1-216ENST00000612404 FERD3LQ96RJ6 166 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 TRIT1Q9H3H1 467 aaKnown RBP17.08■□□□□ 0.33
SREK1-216ENST00000612404 GSTO2Q9H4Y5 243 aa17.08■□□□□ 0.33
SREK1-216ENST00000612404 SCHIP1Q9P0W5 487 aaPredicted RBP17.08■□□□□ 0.33
SREK1-216ENST00000612404 FANCMQ8IYD8 2048 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 A0A1B0GTW7 788 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 A0A1B0GVT2 93 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 EML2O95834 649 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 NME1P15531 152 aaKnown RBP17.08■□□□□ 0.32
SREK1-216ENST00000612404 DRD4P21917 467 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 GDF5P43026 501 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 ATG14Q6ZNE5 492 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 FBXO15Q8NCQ5 510 aaPredicted RBP17.08■□□□□ 0.32
SREK1-216ENST00000612404 AGR3Q8TD06 166 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 PIGKQ92643 395 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 C7orf26Q96N11 449 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 CCT8L2Q96SF2 557 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 SORT1Q99523 831 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 TMEM79Q9BSE2 394 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 HGH1Q9BTY7 390 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 LRRC61Q9BV99 259 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 CD244Q9BZW8 370 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.32
SREK1-216ENST00000612404 PCTPQ9UKL6 214 aa17.08■□□□□ 0.32
SREK1-216ENST00000612404 PRR5-ARHGAP8B1AHC4 643 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 SLC16A8O95907 504 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 RPS17P08708 135 aaKnown RBP17.07■□□□□ 0.32
SREK1-216ENST00000612404 KITP10721 976 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 SERPINB5P36952 375 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 SIM2Q14190 667 aaPredicted RBP17.07■□□□□ 0.32
SREK1-216ENST00000612404 PCBP2Q15366 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
SREK1-216ENST00000612404 RPE65Q16518 533 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 PRR23BQ6ZRT6 265 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 OR9A1PQ8NGU1 263 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 ATL1Q8WXF7 558 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 FBXL8Q96CD0 374 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 THOC1Q96FV9 657 aaKnown RBP17.07■□□□□ 0.32
SREK1-216ENST00000612404 ATG10Q9H0Y0 220 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 STOX2Q9P2F5 926 aaPredicted RBP17.07■□□□□ 0.32
SREK1-216ENST00000612404 OPTCQ9UBM4 332 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 MARCOQ9UEW3 520 aaPredicted RBP17.07■□□□□ 0.32
SREK1-216ENST00000612404 PLAGL1Q9UM63 463 aa17.07■□□□□ 0.32
SREK1-216ENST00000612404 TRBV23OR9-2A0A075B6M9 112 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 MYO1CO00159 1063 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 E2F3O00716 465 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 STK16O75716 305 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 CLCQ05315 142 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ABRAXAS1Q6UWZ7 409 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms