RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PSKH2Q96QS6 385 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CHCHD6Q9BRQ6 235 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SEZ6LQ9BYH1 1024 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 BRD9Q9H8M2 597 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 FARSBQ9NSD9 589 aaKnown RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC25A13Q9UJS0 675 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 PCTPQ9UKL6 214 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 DOCK5Q9H7D0 1870 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SH3PXD2BA1X283 911 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 MTMR11A4FU01 709 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 H0YJX3 145 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 K7ERQ8 282 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 STX16O14662 325 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SEPT4O43236 478 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 TBX1O43435 398 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ASNA1O43681 348 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ABCB7O75027 752 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 EPORP19235 508 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 RRM2P31350 389 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 PRKCZQ05513 592 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 MTA1Q13330 715 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 USP41Q3LFD5 358 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 C6orf141Q5SZD1 244 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ADGRF1Q5T601 910 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKRD26P1Q6NSI1 321 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 PIWIL3Q7Z3Z3 882 aaKnown RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 OR5K1Q8NHB7 308 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 FRS2Q8WU20 508 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ZFYVE19Q96K21 471 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 C8orf48Q96LL4 319 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 VPS35Q96QK1 796 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 BOCQ9BWV1 1114 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CSNK1G1Q9HCP0 422 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 AGPAT4Q9NRZ5 378 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 EHD3Q9NZN3 535 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC22A14Q9Y267 594 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 COL4A5P29400 1685 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SYN3O14994 580 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 HOXA2O43364 376 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 LZTS3O60299 673 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CLPXO76031 633 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CATP04040 527 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 FABP3P05413 133 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 GABRR2P28476 465 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SPAM1P38567 509 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MAP2K4P45985 399 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 HLCSP50747 726 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SNRPD1P62314 119 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 GALNT1Q10472 559 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CRHR2Q13324 411 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ACOX1Q15067 660 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SKIV2LQ15477 1246 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SERINC5Q86VE9 423 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PELI3Q8N2H9 469 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PGBD5Q8N414 524 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 KCNJ9Q92806 393 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ABHD8Q96I13 439 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MAELQ96JY0 434 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ATOH8Q96SQ7 321 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 NPLQ9BXD5 320 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 WDR12Q9GZL7 423 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 DYRK4Q9NR20 520 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 AASDHPPTQ9NRN7 309 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 KCTD5Q9NXV2 234 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TUBA8Q9NY65 449 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 VAPAQ9P0L0 249 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CFAP97Q9P2B7 532 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MTRRQ9UBK8 725 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 AP3M1Q9Y2T2 418 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 GPR45Q9Y5Y3 372 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CPQQ9Y646 472 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MYO7AQ13402 2215 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CLIC1O00299 241 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MITFO75030 526 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 UGT2B11O75310 529 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CYP7B1O75881 506 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 FGF4P08620 206 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CD36P16671 472 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 GJA1P17302 382 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 AGXTP21549 392 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PAX3P23760 479 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 HTR1EP28566 365 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 POLR2IP36954 125 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ALDH6A1Q02252 535 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 NFATC3Q12968 1075 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MOGQ16653 247 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PDCD4Q53EL6 469 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 NHSL2Q5HYW2 709 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CPTPQ5TA50 214 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TXNDC8Q6A555 127 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TYW3Q6IPR3 259 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ITIH5Q86UX2 942 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC22A15Q8IZD6 547 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC15A4Q8N697 577 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 GTPBP3Q969Y2 492 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms