RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 TRAPPC9Q96Q05 1148 aa12.81□□□□□ -0.36
TOM1-218ENST00000608674 TRIM4Q9C037 500 aa12.81□□□□□ -0.36
TOM1-218ENST00000608674 ACTR5Q9H9F9 607 aaPredicted RBP12.81□□□□□ -0.36
TOM1-218ENST00000608674 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
TOM1-218ENST00000608674 OR6C2Q9NZP2 312 aa12.81□□□□□ -0.36
TOM1-218ENST00000608674 ICKQ9UPZ9 632 aa12.81□□□□□ -0.36
TOM1-218ENST00000608674 FARSAQ9Y285 508 aaKnown RBP12.81□□□□□ -0.36
TOM1-218ENST00000608674 PPP2R2CQ9Y2T4 447 aa12.81□□□□□ -0.36
TOM1-218ENST00000608674 PIKFYVEQ9Y2I7 2098 aa12.81□□□□□ -0.36
TOM1-218ENST00000608674 SPTBP11277 2137 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 E7EQ34 232 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 MEN1O00255 615 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 PRMT5O14744 637 aaPredicted RBP12.8□□□□□ -0.36
TOM1-218ENST00000608674 NDUFS3O75489 264 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 RFPL1O75677 317 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 WISP1O95388 367 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 CHRM5P08912 532 aaPredicted RBP12.8□□□□□ -0.36
TOM1-218ENST00000608674 FURINP09958 794 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 MSL3P1P0C860 447 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 UGT2B7P16662 529 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 CCR7P32248 378 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 ITGA1P56199 1179 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 CRADDP78560 199 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 SARNPP82979 210 aaKnown RBP12.8□□□□□ -0.36
TOM1-218ENST00000608674 CDK16Q00536 496 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 ABRQ12979 859 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 GPS2Q13227 327 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 LACTB2Q53H82 288 aaPredicted RBP12.8□□□□□ -0.36
TOM1-218ENST00000608674 PRAMEF17Q5VTA0 474 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 SYVN1Q86TM6 617 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 LDB1Q86U70 411 aaPredicted RBP12.8□□□□□ -0.36
TOM1-218ENST00000608674 TRIM73Q86UV7 250 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 C19orf47Q8N9M1 422 aaKnown RBP12.8□□□□□ -0.36
TOM1-218ENST00000608674 CFAP61Q8NHU2 1237 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 TCTN2Q96GX1 697 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 LRFN5Q96NI6 719 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 CARD6Q9BX69 1037 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 CHST8Q9H2A9 424 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 CLMPQ9H6B4 373 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 PLAGL1Q9UM63 463 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 FLNCQ14315 2725 aa12.8□□□□□ -0.36
TOM1-218ENST00000608674 PRRC2CQ9Y520 2896 aaKnown RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 A0A0J9YY10 115 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 ISM1B1AKI9 464 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 PFDN6O15212 129 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 HBQ1P09105 142 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 CSRP3P50461 194 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 TERF1P54274 439 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 PMS2P54278 862 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 RPS18P62269 152 aaKnown RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 CCZ1BP86790 482 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 CCZ1P86791 482 aaPredicted RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 SEMA3AQ14563 771 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 KIR2DS3Q14952 304 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 TRIP13Q15645 432 aaPredicted RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 TTC23LQ6PF05 361 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 CDHR3Q6ZTQ4 885 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 SDCCAG8Q86SQ7 713 aaPredicted RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 TMEM135Q86UB9 458 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 SLC22A15Q8IZD6 547 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 DSELQ8IZU8 1212 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 MPP5Q8N3R9 675 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 SLC38A9Q8NBW4 561 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 SKA2Q8WVK7 121 aaPredicted RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 THAP4Q8WY91 577 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 PANX3Q96QZ0 392 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 RUFY1Q96T51 708 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 SPHK1Q9NYA1 384 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 GNPTGQ9UJJ9 305 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 ANAPC2Q9UJX6 822 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 TTC7AQ9ULT0 858 aaPredicted RBP12.79□□□□□ -0.36
TOM1-218ENST00000608674 SNX7Q9UNH6 387 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
TOM1-218ENST00000608674 UBR5O95071 2799 aaPredicted RBP12.78□□□□□ -0.36
TOM1-218ENST00000608674 IQCF5A8MTL0 148 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 C9J4A7 227 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 KPNA5O15131 536 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 ZNF749O43361 778 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 GPC4O75487 556 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 RAB40ALP0C0E4 278 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 TPSB2P20231 275 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 AGXTP21549 392 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 MGAT1P26572 445 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 AOAHP28039 575 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 NMBRP28336 390 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 VPS41P49754 854 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 RAB28P51157 221 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 TPSAB1Q15661 275 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 UGT8Q16880 541 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 MRNIPQ6NTE8 343 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 LRRC8BQ6P9F7 803 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 SYTL1Q8IYJ3 562 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
TOM1-218ENST00000608674 ENDOVQ8N8Q3 282 aaKnown RBP12.78□□□□□ -0.36
TOM1-218ENST00000608674 PRELID2Q8N945 189 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms