RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 VEPH1Q14D04 833 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 CHST9Q7L1S5 443 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 MSRB3Q8IXL7 192 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 RHBDF1Q96CC6 855 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 FRMPD3Q5JV73 1810 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 ELOVL7A1L3X0 281 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 MITFO75030 526 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-213ENST00000607923 PDYNP01213 254 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 CD70P32970 193 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 CDKN2CP42773 168 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 RPIAP49247 311 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 ALDH3A2P51648 485 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 NUP107P57740 925 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 GRIK2Q13002 908 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-213ENST00000607923 SNX20Q7Z614 316 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-213ENST00000607923 FAM120BQ96EK7 910 aaKnown RBP13.47□□□□□ -0.25
CTCFL-213ENST00000607923 OSBPL6Q9BZF3 934 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 CD320Q9NPF0 282 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 NEUROG3Q9Y4Z2 214 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 PCDHB14Q9Y5E9 798 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
CTCFL-213ENST00000607923 GOLGA4Q13439 2230 aaKnown RBP13.46□□□□□ -0.25
CTCFL-213ENST00000607923 MANBAO00462 879 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 FZD6O60353 706 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 XYLBO75191 536 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 STK16O75716 305 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 TRBC1P01850 177 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 ALPLP05186 524 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 BCKDHAP12694 445 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 GSSP48637 474 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 CASP9P55211 416 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 LSM3P62310 102 aaKnown RBP13.46□□□□□ -0.25
CTCFL-213ENST00000607923 PHC1P78364 1004 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 SLC8B1Q6J4K2 584 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 ANKRD26P1Q6NSI1 321 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.25
CTCFL-213ENST00000607923 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 SLC22A17Q8WUG5 538 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 FOXJ1Q92949 421 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 APOLD1Q96LR9 279 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 HIPK3Q9H422 1215 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 MAGEE1Q9HCI5 957 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 GPRC5BQ9NZH0 403 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 DOCK6Q96HP0 2047 aa13.46□□□□□ -0.25
CTCFL-213ENST00000607923 K7EPI3 171 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 AREL1O15033 823 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 PFKLP17858 780 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 ACRV1P26436 265 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 KCNAB2Q13303 367 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 TSTA3Q13630 321 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-213ENST00000607923 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-213ENST00000607923 ATP13A5Q4VNC0 1218 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 ACBD5Q5T8D3 534 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-213ENST00000607923 BBS7Q8IWZ6 715 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 DPP10Q8N608 796 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 ERLEC1Q96DZ1 483 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 ACPTQ9BZG2 426 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 LHPPQ9H008 270 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 MUC13Q9H3R2 512 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 OARD1Q9Y530 152 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 C5orf42Q9H799 3197 aa13.46□□□□□ -0.26
CTCFL-213ENST00000607923 H7C0S8 307 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 XPNPEP2O43895 674 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 WDR47O94967 919 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 HNRNPCP07910 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTCFL-213ENST00000607923 FSHRP23945 695 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 TM4SF4P48230 202 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 LRRC66Q68CR7 880 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 ELMSAN1Q6PJG2 1045 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 VRK3Q8IV63 474 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 C8orf59Q8N0T1 100 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-213ENST00000607923 PAPD5Q8NDF8 572 aaKnown RBP13.45□□□□□ -0.26
CTCFL-213ENST00000607923 ZNF548Q8NEK5 533 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-213ENST00000607923 BARD1Q99728 777 aaKnown RBP13.45□□□□□ -0.26
CTCFL-213ENST00000607923 AMBRA1Q9C0C7 1298 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 ELOVL6Q9H5J4 265 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 CFAP97Q9P2B7 532 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 SCN5AQ14524 2016 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 GABRR2P28476 465 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 NKX3-2P78367 333 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 LMAN2Q12907 356 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 SLC14A1Q13336 389 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 MYBPC3Q14896 1274 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 KIAA0040Q15053 153 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 PON2Q15165 354 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
CTCFL-213ENST00000607923 CERS6Q6ZMG9 384 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms