RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ANKHD1Q8IWZ3 2542 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 PKDREJQ9NTG1 2253 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 A0A0J9YY10 115 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 AGAP14A8MT82 685 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 GOLGA6L19H0YKK7 550 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 LIN7AO14910 233 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 AURKAO14965 403 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 LRRTM2O43300 516 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A9O60656 530 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 KLF7O75840 302 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 SRP72O76094 671 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 USP1O94782 785 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 AP2A2O94973 939 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 MLYCDO95822 493 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 FTH1P02794 183 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 KRT1P04264 644 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 POLBP06746 335 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 STSP08842 583 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 FBXO45P0C2W1 286 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 TMEM253P0C7T8 217 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ATP1B2P14415 290 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 ST6GAL1P15907 406 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A6P19224 532 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 NFKB1P19838 968 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A1P22309 533 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A4P22310 534 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 MMP11P24347 488 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 PBLDP30039 288 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 HNRNPH3P31942 346 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 CETN2P41208 172 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 LMAN1P49257 510 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 RBPJQ06330 500 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 TRIM14Q14142 442 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 MESDQ14696 234 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ZNF169Q14929 603 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 KIR2DS3Q14952 304 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 NAA25Q14CX7 972 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 PTCHD3Q3KNS1 767 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ANO6Q4KMQ2 910 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 NKAIN1Q4KMZ8 207 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ZNF789Q5FWF6 425 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ZC3H12BQ5HYM0 836 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 TCTE1Q5JU00 501 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 PRAMEF13Q5VWM6 474 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ZNF385CQ66K41 422 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 SPESP1Q6UW49 350 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 KDELC1Q6UW63 502 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 IGFL2Q6UWQ7 119 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 RPTNQ6XPR3 784 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 CERS6Q6ZMG9 384 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 GDF7Q7Z4P5 450 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 SNX20Q7Z614 316 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 KCNMB4Q86W47 210 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 NXPE1Q8N323 547 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 IPMKQ8NFU5 416 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 RAPGEF5Q92565 580 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 TFGQ92734 400 aaPredicted RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 C19orf60Q96EN9 201 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 MRFAP1L1Q96HT8 127 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 RMDN2Q96LZ7 410 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 ALS2CR12Q96Q35 445 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 USB1Q9BQ65 265 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 CEP41Q9BYV8 373 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 LHPPQ9H008 270 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 SLC26A1Q9H2B4 701 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A7Q9HAW7 530 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A10Q9HAW8 530 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 UGT1A8Q9HAW9 530 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 LUC7LQ9NQ29 371 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 UBP1Q9NZI7 540 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 LUZP4Q9P127 313 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 COPG2Q9UBF2 871 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 PLCL2Q9UPR0 1127 aa6.08□□□□□ -1.44
CUX1-220ENST00000607092 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
CUX1-220ENST00000607092 SPTBP11277 2137 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 A0A1B0GX78 115 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 DYTNA2CJ06 578 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 C3orf70A6NLC5 250 aaPredicted RBP6.07□□□□□ -1.44
CUX1-220ENST00000607092 PRSS44E7EML9 344 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 F5H423 210 aaPredicted RBP6.07□□□□□ -1.44
CUX1-220ENST00000607092 BTN3A1O00481 513 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 PRPF4O43172 522 aaKnown RBP eCLIP6.07□□□□□ -1.445e-6■□□□□ 9.1
CUX1-220ENST00000607092 PSTPIP1O43586 416 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 SPOPO43791 374 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 AKR1B10O60218 316 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 RNF224P0DH78 156 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 COL8A1P27658 744 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 PPARGP37231 505 aaPredicted RBP6.07□□□□□ -1.44
CUX1-220ENST00000607092 NSG1P42857 185 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 CASP6P55212 293 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 UBASH3AP57075 661 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 TAS2R40P59535 323 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 DYNLT1P63172 113 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 FANCCQ00597 558 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 CDC16Q13042 620 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 RAPSNQ13702 412 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 BOP1Q14137 746 aaKnown RBP6.07□□□□□ -1.44
CUX1-220ENST00000607092 LLGL1Q15334 1064 aa6.07□□□□□ -1.44
CUX1-220ENST00000607092 ZXDCQ2QGD7 858 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms