RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TCFL5Q9UL49 500 aa20.53■□□□□ 0.88
PPFIA3-209ENST00000602783 RP1L1Q8IWN7 2480 aaPredicted RBP20.53■□□□□ 0.88
PPFIA3-209ENST00000602783 TTLL8A6PVC2 850 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 APRTP07741 180 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 GSTM1P09488 218 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 MSL3P1P0C860 447 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 ZSCAN5DPP0CG00 497 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 GSTM4Q03013 218 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 BRD3Q15059 726 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 PTCHD3Q3KNS1 767 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 TSTD2Q5T7W7 516 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 AFTPHQ6ULP2 937 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 CDHR3Q6ZTQ4 885 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 LRRC8AQ8IWT6 810 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 SYTL1Q8IYJ3 562 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 HDAC10Q969S8 669 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 MLXIPLQ9NP71 852 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 CASS4Q9NQ75 786 aa20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 PCDHGA9Q9Y5G4 932 aaKnown RBP20.52■□□□□ 0.88
PPFIA3-209ENST00000602783 E7EQ34 232 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 QSOX1O00391 747 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 LIN7AO14910 233 aaPredicted RBP20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 GOT2P00505 430 aaKnown RBP20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 CAPN1P07384 714 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 ITGA1P56199 1179 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 CCZ1BP86790 482 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 CCZ1P86791 482 aaPredicted RBP20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 CCNG2Q16589 344 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 SPESP1Q6UW49 350 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 HOOK3Q86VS8 718 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 FAM26EQ8N5C1 309 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 OR5AR1Q8NGP9 310 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 ELMO1Q92556 727 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 ZNF778Q96MU6 729 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 ICKQ9UPZ9 632 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 ASF1AQ9Y294 204 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 TCAF1Q9Y4C2 921 aa20.51■□□□□ 0.87
PPFIA3-209ENST00000602783 ZNF749O43361 778 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 TMEM63AO94886 807 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 FGGP02679 453 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 FTH1P02794 183 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 ADRA1DP25100 572 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 RPL22P35268 128 aaKnown RBP20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 ACVR1Q04771 509 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 NADK2Q4G0N4 442 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 FAM198BQ6UWH4 519 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 NAPRTQ6XQN6 538 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 UNC5AQ6ZN44 842 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 TRIM73Q86UV7 250 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 PPHLN1Q8NEY8 458 aaKnown RBP20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 TRIM58Q8NG06 486 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 N4BP2L2Q92802 583 aaPredicted RBP20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 RIMKLBQ9ULI2 386 aa20.5■□□□□ 0.87
PPFIA3-209ENST00000602783 OR1I1O60431 355 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 VPS4BO75351 444 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 HBQ1P09105 142 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 ACADLP28330 430 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 SYTL3Q4VX76 610 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 PAPD7Q5XG87 772 aaKnown RBP20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 DRICH1Q6PGQ1 229 aaPredicted RBP20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 ZNF534Q76KX8 674 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 TBC1D21Q8IYX1 336 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 GPR135Q8IZ08 494 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 EFCAB3Q8N7B9 438 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 CPT1CQ8TCG5 803 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 FAM60AQ9NP50 221 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 VPS4AQ9UN37 437 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 TDRKHQ9Y2W6 561 aaKnown RBP20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 SPENQ96T58 3664 aaKnown RBP20.49■□□□□ 0.87
PPFIA3-209ENST00000602783 ZNF185O15231 689 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 OR56A5P0C7T3 313 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 UGT2B7P16662 529 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 AGXTP21549 392 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 SHMT2P34897 504 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 PRAMEP78395 509 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 BASP1P80723 227 aaKnown RBP20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 SEMA3AQ14563 771 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 NCF4Q15080 339 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 LYPLAL1Q5VWZ2 237 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 NLRP9Q7RTR0 991 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 ZBTB2Q8N680 514 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 C19orf47Q8N9M1 422 aaKnown RBP20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 OR6P1Q8NGX9 317 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 OR4L1Q8NH43 312 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 MAIP1Q8WWC4 291 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 TCTN2Q96GX1 697 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 OR2A14Q96R47 310 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 DPH2Q9BQC3 489 aaPredicted RBP20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 EIF2B3Q9NR50 452 aaKnown RBP20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 SPHK1Q9NYA1 384 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 POLG2Q9UHN1 485 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 DRG1Q9Y295 367 aaKnown RBP20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 ZNF451Q9Y4E5 1061 aa20.48■□□□□ 0.87
PPFIA3-209ENST00000602783 SLC5A10A0PJK1 596 aa20.47■□□□□ 0.87
PPFIA3-209ENST00000602783 A6NL46 340 aa20.47■□□□□ 0.87
PPFIA3-209ENST00000602783 C9J4A7 227 aa20.47■□□□□ 0.87
PPFIA3-209ENST00000602783 CEP104O60308 925 aa20.47■□□□□ 0.87
PPFIA3-209ENST00000602783 CEACAM4O75871 244 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms