RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TAS2R7Q9NYW3 318 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SEC14L3Q9UDX4 400 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 HTR1BP28222 390 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 STXBP1P61764 594 aaKnown RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SLC9B1Q4ZJI4 515 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ANKS1BQ7Z6G8 1248 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 OAFQ86UD1 273 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 KAT2AQ92830 837 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MYOCQ99972 504 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 AIF1LQ9BQI0 150 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 INTS7Q9NVH2 962 aaKnown RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TAS2R9Q9NYW1 312 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF536O15090 1300 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 CXCL11O14625 94 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SEPT4O43236 478 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SPARCP09486 303 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TFPIP10646 304 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 KELP23276 732 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SSR2P43308 183 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MTPNP58546 118 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 GCNT6Q5T4J0 391 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 CHST15Q7LFX5 561 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 OR2L2Q8NH16 312 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 NUDT15Q9NV35 164 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ATP6V1G2-DDX39BF2Z307 99 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 FEM1CQ96JP0 617 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SUCOQ9UBS9 1254 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CFL2Q9Y281 166 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 VWA7Q9Y334 891 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 AKAP12Q02952 1782 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 A0A1B0GV50 99 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CHST10O43529 356 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 VEGFAP15692 232 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 RHDQ02161 417 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 PRKCDQ05655 676 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ENDOVQ8N8Q3 282 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 TCEAL4Q96EI5 215 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 FCRL2Q96LA5 508 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 HOPXQ9BPY8 73 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 GLIS2Q9BZE0 524 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 MAF1Q9H063 256 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF638Q14966 1978 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 FUOMA2VDF0 154 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ARPC2O15144 300 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 TPST2O60704 377 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SCGB1D2O95969 90 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CLUP10909 449 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CDKN2CP42773 168 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 TBC1D25Q3MII6 688 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 FATE1Q969F0 183 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SPATA9Q9BWV2 254 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ELK4P28324 431 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 MRPS5P82675 430 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF404Q494X3 552 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 OR2L3Q8NG85 312 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 OR6C4Q8NGE1 309 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 NDRG1Q92597 394 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 KCTD15Q96SI1 283 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 IMP3Q9NV31 184 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 MGAT4AQ9UM21 535 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CLCA3PQ9Y6N3 262 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 INMTO95050 263 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SNAP29O95721 258 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 PIGFQ07326 219 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 GALNT7Q86SF2 657 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 TMPRSS11BQ86T26 416 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 VSIG10LQ86VR7 867 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 RIT1Q92963 219 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 MFSD1Q9H3U5 465 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CMAHPQ9Y471 501 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 GPIP06744 558 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SLC7A1P30825 629 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SLC13A2Q13183 592 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 POU4F3Q15319 338 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ZBTB6Q15916 424 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 UBE2R2Q712K3 238 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ESX1Q8N693 406 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF248Q8NDW4 579 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 UCK2Q9BZX2 261 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CDT1Q9H211 546 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 RBM7Q9Y580 266 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 RLN2P04090 185 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 NUDT6P53370 316 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 HNRNPA0Q13151 305 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 PRKD1Q15139 912 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 SNX29P2Q8IUI4 249 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 MRPS23Q9Y3D9 190 aaKnown RBP8.55□□□□□ -1.04
CSMD1-216ENST00000602557 ARHGAP23Q9P227 1491 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 RIIAD1A6NNX1 92 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CAPN15O75808 1086 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 OR2B3O76000 313 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 CD97P48960 835 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 MEP1AQ16819 746 aa8.55□□□□□ -1.04
CSMD1-216ENST00000602557 POMZP3Q6PJE2 187 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms