RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 FERD3LQ96RJ6 166 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 PAIP2Q9BPZ3 127 aaKnown RBP22.32■■□□□ 1.16
IRF3-227ENST00000600911 MENTQ9BUN1 341 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 RXFP3Q9NSD7 469 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 SIRPGQ9P1W8 387 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 LMO7DNF2Z398 122 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 IFRD1O00458 451 aaPredicted RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 SLC16A5O15375 505 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 NOBOXO60393 691 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 SIX3O95343 332 aaPredicted RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 BPGMP07738 259 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 MYF5P13349 255 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 CPA3P15088 417 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 DPP6P42658 865 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 RPIAP49247 311 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 MAZP56270 477 aaKnown RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 SP140Q13342 867 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 OR5K2Q8NHB8 316 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 SAP25Q8TEE9 199 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 TMEM79Q9BSE2 394 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 GTPBP2Q9BX10 602 aaKnown RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 SPEGQ15772 3267 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 LNP1A1A4G5 178 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 POLR3GO15318 223 aaPredicted RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 KLK8O60259 260 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 UBE2IP63279 158 aaKnown RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 TTC19Q6DKK2 380 aaPredicted RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 ZCCHC23Q6ZST2 131 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 RABEPKQ7Z6M1 372 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 FAM76AQ8TAV0 307 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 PRRX2Q99811 253 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 RDH14Q9HBH5 336 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 NKIRAS1Q9NYS0 192 aa22.31■■□□□ 1.16
IRF3-227ENST00000600911 TDRKHQ9Y2W6 561 aaKnown RBP22.31■■□□□ 1.16
IRF3-227ENST00000600911 OTOGLQ3ZCN5 2332 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 CATP04040 527 aaKnown RBP22.3■■□□□ 1.16
IRF3-227ENST00000600911 RETP07949 1114 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 CCR10P46092 362 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 ARRB1P49407 418 aaPredicted RBP22.3■■□□□ 1.16
IRF3-227ENST00000600911 KPNA2P52292 529 aaKnown RBP22.3■■□□□ 1.16
IRF3-227ENST00000600911 PFKFB4Q16877 469 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 FRA10AC1Q70Z53 315 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 GKN2Q86XP6 184 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 SFRP1Q8N474 314 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 PTGR2Q8N8N7 351 aaPredicted RBP22.3■■□□□ 1.16
IRF3-227ENST00000600911 PDPRQ8NCN5 879 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 PPFIBP2Q8ND30 876 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 RHBDF1Q96CC6 855 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 FOPNLQ96NB1 174 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 TMEM237Q96Q45 408 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 NCKIPSDQ9NZQ3 722 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 CD274Q9NZQ7 290 aa22.3■■□□□ 1.16
IRF3-227ENST00000600911 MYO1CO00159 1063 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 SNRNP200O75643 2136 aaKnown RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 MYL2P10916 166 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 FGF3P11487 239 aaPredicted RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 CYP2A7P20853 494 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 IMPA1P29218 277 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 ARRB2P32121 409 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 NBL1P41271 181 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 HALP42357 657 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 GUCY1A3Q02108 690 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 SPEM2Q0P670 501 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 FASTKQ14296 549 aaKnown RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 HHATQ5VTY9 493 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 ZNF761Q86XN6 746 aaPredicted RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 MINDY1Q8N5J2 469 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 FBXO15Q8NCQ5 510 aaPredicted RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 CAMK1GQ96NX5 476 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 PHOX2BQ99453 314 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 NUSAP1Q9BXS6 441 aaKnown RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 XKR8Q9H6D3 395 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 PARD6AQ9NPB6 346 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 OXSMQ9NWU1 459 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 ARL15Q9NXU5 204 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 NUDT4Q9NZJ9 180 aa22.29■■□□□ 1.16
IRF3-227ENST00000600911 GOLGA4Q13439 2230 aaKnown RBP22.29■■□□□ 1.16
IRF3-227ENST00000600911 KHNYNO15037 678 aaKnown RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 SLC16A8O95907 504 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 ANXA6P08133 673 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 ENO2P09104 434 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 BGNP21810 368 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 ATP5F1P24539 256 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 GDF5P43026 501 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 DCUN1D3Q8IWE4 304 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 TBC1D21Q8IYX1 336 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 C2orf73Q8N5S3 287 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 KYQ8NBH2 561 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 OR52E1Q8NGJ3 308 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 ATG10Q9H0Y0 220 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 TRIT1Q9H3H1 467 aaKnown RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 ZNF395Q9H8N7 513 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 CNOT10Q9H9A5 744 aaKnown RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 INTS9Q9NV88 658 aaKnown RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 STOX2Q9P2F5 926 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 PTBP2Q9UKA9 531 aaKnown RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 DOLKQ9UPQ8 538 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 TRIM38O00635 465 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 GFAPP14136 432 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 XRCC1P18887 633 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms