RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NOL3O60936 208 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 ABCB7O75027 752 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 B3GALT4O96024 378 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 BCKDHAP12694 445 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 EPB42P16452 691 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 MAP4P27816 1152 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TPD52P55327 224 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 PHC1P78364 1004 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 ZXDBP98169 803 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 PIGFQ07326 219 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 CPSF6Q16630 551 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC44A4Q53GD3 710 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 RBM23Q86U06 439 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC43A3Q8NBI5 491 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 GLB1L3Q8NCI6 653 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 SNRNP27Q8WVK2 155 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TMEM175Q9BSA9 504 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 NTMT1Q9BV86 223 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 LMCD1Q9NZU5 365 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TMEM9Q9P0T7 183 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TDRKHQ9Y2W6 561 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 PCDHB14Q9Y5E9 798 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 JUNBP17275 347 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 CCNA2P20248 432 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 BCL2L1Q07817 233 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 KCNAB2Q13303 367 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 PON2Q15165 354 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 CTU2Q2VPK5 515 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 USP39Q53GS9 565 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TTC23Q5W5X9 447 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TSPAN33Q86UF1 283 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 MICU2Q8IYU8 434 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 CRIPAKQ8N1N5 446 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 CHCHD4Q8N4Q1 142 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 CHDHQ8NE62 594 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 KAT8Q9H7Z6 458 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 DNAAF2Q9NVR5 837 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 DNMT3BQ9UBC3 853 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 STOML2Q9UJZ1 356 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 DLGAP4Q9Y2H0 992 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 U3KQV3 271 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 TRBV5-4A0A0C4DH59 114 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 GSNP06396 782 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 HTR1AP08908 422 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 EBLN1P0CF75 366 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 CDKN3Q16667 212 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 RBM48Q5RL73 367 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 KIAA1841Q6NSI8 718 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 ANKRD46Q86W74 232 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 SPARTQ8N0X7 666 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 NAT16Q8N8M0 369 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 USP7Q93009 1102 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 CNDP2Q96KP4 475 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 CEP295NLQ96MC4 621 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 MRPL9Q9BYD2 267 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 ACPTQ9BZG2 426 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 TNKS2Q9H2K2 1166 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 C1orf109Q9NX04 203 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 AFF4Q9UHB7 1163 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 TRPS1Q9UHF7 1281 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 YIPF1Q9Y548 306 aa19.77■□□□□ 0.76
SHKBP1-225ENST00000600733 TRBV5-3A0A0A0MS03 114 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 CREG1O75629 220 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 STK16O75716 305 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 SCELO95171 688 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 AGXTP21549 392 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 ALDH7A1P49419 539 aaKnown RBP19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 TMBIM6P55061 237 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 ZSWIM9Q86XI8 627 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 DCAF4L2Q8NA75 395 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 HJURPQ8NCD3 748 aaPredicted RBP19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF555Q8NEP9 628 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 PJA1Q8NG27 643 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 NETO1Q8TDF5 533 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 FRS2Q8WU20 508 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 UBTD2Q8WUN7 234 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 RDH12Q96NR8 316 aa19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 DCAF13Q9NV06 445 aaKnown RBP19.77■□□□□ 0.75
SHKBP1-225ENST00000600733 HS6ST1O60243 411 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 WDR47O94967 919 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 SERPINA1P01009 418 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 INHBBP09529 407 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 EPORP19235 508 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 SMU1Q2TAY7 513 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 C6orf141Q5SZD1 244 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 MACC1Q6ZN28 852 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 TMEM150AQ86TG1 271 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF461Q8TAF7 563 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 ADAMTS19Q8TE59 1207 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 HDAC2Q92769 488 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 CSF3RQ99062 836 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 SH3GL1Q99961 368 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 RBM4BQ9BQ04 359 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 INPP5KQ9BT40 448 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 RBM4Q9BWF3 364 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 EXD2Q9NVH0 621 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 LAMA3Q16787 3333 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 PDYNP01213 254 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 NRIP1P48552 1158 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms