RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PHC3Q8NDX5 983 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 OR5AR1Q8NGP9 310 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 GABPB2Q8TAK5 448 aaPredicted RBP15.71■□□□□ 0.11
LSM4-206ENST00000600289 LCN9Q8WX39 176 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 JPH3Q8WXH2 748 aaPredicted RBP15.71■□□□□ 0.11
LSM4-206ENST00000600289 TTC9Q92623 222 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 SLC41A2Q96JW4 573 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 SLC39A1Q9NY26 324 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 IL1RAPL1Q9NZN1 696 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 FOXJ2Q9P0K8 574 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 WHRNQ9P202 907 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 KLHL42Q9P2K6 505 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 POMT2Q9UKY4 750 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 ASF1AQ9Y294 204 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 OR6C74A6NCV1 312 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 KIF2AO00139 706 aaPredicted RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 RAD51CO43502 376 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 KIF1CO43896 1103 aaKnown RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 RPN2P04844 631 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 NELFEP18615 380 aaKnown RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 FMO4P31512 558 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 SHMT2P34897 504 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 UCNP55089 124 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 PPP1CAP62136 330 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 C2orf54Q08AI8 447 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 PRKAA1Q13131 559 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 CLN3Q13286 438 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 BRD3Q15059 726 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 BBS9Q3SYG4 887 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 DCAF12Q5T6F0 453 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 ARMC6Q6NXE6 501 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 CEACAM20Q6UY09 585 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 FAM92BQ6ZTR7 304 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 KIAA0408Q6ZU52 694 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 OTOAQ7RTW8 1153 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 AMIGO1Q86WK6 493 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 FAM129CQ86XR2 697 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 DENND6AQ8IWF6 608 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 C2CD4AQ8NCU7 369 aaPredicted RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 OR4E2Q8NGC2 313 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 KCNJ9Q92806 393 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 ART4Q93070 314 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 PMEPA1Q969W9 287 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 WDR83Q9BRX9 315 aaKnown RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 HGH1Q9BTY7 390 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 SRMSQ9H3Y6 488 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 PLAC1Q9HBJ0 212 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 OR6C2Q9NZP2 312 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 ICKQ9UPZ9 632 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 CRYL1Q9Y2S2 319 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 MRFAP1Q9Y605 127 aa15.7■□□□□ 0.1
LSM4-206ENST00000600289 SNRNP200O75643 2136 aaKnown RBP15.7■□□□□ 0.1
LSM4-206ENST00000600289 IGHV5-51A0A0C4DH38 117 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 BTN3A1O00481 513 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 NIPSNAP2O75323 286 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 BANF1O75531 89 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 RASSF9O75901 435 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 TPBGLP0DKB5 382 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 ELK3P41970 407 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 KPNA2P52292 529 aaKnown RBP15.69■□□□□ 0.1
LSM4-206ENST00000600289 CTBP1Q13363 440 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 IL11RAQ14626 422 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 WHAMMP3Q1A5X7 153 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 HSP90AA5PQ58FG0 334 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 ZNF789Q5FWF6 425 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 DUPD1Q68J44 220 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 IGDCC3Q8IVU1 814 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 DCUN1D3Q8IWE4 304 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 ADGRF3Q8IZF5 1079 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 CERS2Q96G23 380 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 PITPNM3Q9BZ71 974 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 TRIM31Q9BZY9 425 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 SPRY4Q9C004 299 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 PHACTR1Q9C0D0 580 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 C1GALT1Q9NS00 363 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 FBXO5Q9UKT4 447 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 BTRCQ9Y297 605 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 MED16Q9Y2X0 877 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 SNX24Q9Y343 169 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 PCDHB11Q9Y5F2 797 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 B3GALT1Q9Y5Z6 326 aa15.69■□□□□ 0.1
LSM4-206ENST00000600289 SPTAN1Q13813 2472 aaKnown RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 STMND1H3BQB6 276 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 BTN3A3O00478 584 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 ZBTB11O95625 1053 aaPredicted RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 MSL3P1P0C860 447 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 CLCN7P51798 805 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 CSE1LP55060 971 aaKnown RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 HSD11B2P80365 405 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 CALCOCO2Q13137 446 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 PRKG2Q13237 762 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 GRB7Q14451 532 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 KYNUQ16719 465 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 BROXQ5VW32 411 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 ANKS6Q68DC2 871 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 ZNF549Q6P9A3 640 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 UNC5AQ6ZN44 842 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 NEK10Q6ZWH5 1172 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 UNC5BQ8IZJ1 945 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms