RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ABRQ12979 859 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 ZNF789Q5FWF6 425 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 CDHR3Q6ZTQ4 885 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 PRUNE1Q86TP1 453 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 SLC22A15Q8IZD6 547 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 OR2A14Q96R47 310 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 NRTNQ99748 197 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 NLNQ9BYT8 704 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 TRIM4Q9C037 500 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 IL22Q9GZX6 179 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 CHST8Q9H2A9 424 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 ACTR5Q9H9F9 607 aaPredicted RBP15.29■□□□□ 0.04
VRK3-221ENST00000600284 LZTFL1Q9NQ48 299 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 CHRAC1Q9NRG0 131 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 TENM4Q6N022 2769 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 E7EQ34 232 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 PRMT5O14744 637 aaPredicted RBP15.28■□□□□ 0.04
VRK3-221ENST00000600284 GPC4O75487 556 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 FGGP02679 453 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 RPN2P04844 631 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 ZSCAN5DPP0CG00 497 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 TPBGLP0DKB5 382 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 UGT2B7P16662 529 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 CCR7P32248 378 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 KLRB1Q12918 225 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 KIR2DS3Q14952 304 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 GSTA5Q7RTV2 222 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 TMEM135Q86UB9 458 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 LRRC8AQ8IWT6 810 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 GPR135Q8IZ08 494 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 MPP5Q8N3R9 675 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 C19orf47Q8N9M1 422 aaKnown RBP15.28■□□□□ 0.04
VRK3-221ENST00000600284 RUFY1Q96T51 708 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 SLC7A5P2Q9GIP4 190 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 TREX1Q9NSU2 369 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 CATSPERZQ9NTU4 200 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 PCMTD2Q9NV79 361 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 BFARQ9NZS9 450 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 TLK1Q9UKI8 766 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 TP53TG5Q9Y2B4 290 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 TDRKHQ9Y2W6 561 aaKnown RBP15.28■□□□□ 0.04
VRK3-221ENST00000600284 AP1M2Q9Y6Q5 423 aa15.28■□□□□ 0.04
VRK3-221ENST00000600284 A0A0J9YY10 115 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 KPNA5O15131 536 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 CD3EAPO15446 510 aaKnown RBP15.27■□□□□ 0.04
VRK3-221ENST00000600284 SLCO2B1O94956 709 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 APOA4P06727 396 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 PVRP15151 417 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 RPS18P62269 152 aaKnown RBP15.27■□□□□ 0.04
VRK3-221ENST00000600284 BASP1P80723 227 aaKnown RBP15.27■□□□□ 0.04
VRK3-221ENST00000600284 HSPA14Q0VDF9 509 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 SEMA3AQ14563 771 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 SLC5A12Q1EHB4 618 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 PRAMEF17Q5VTA0 474 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 ARMC3Q5W041 872 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 UNC5DQ6UXZ4 953 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 NAPRTQ6XQN6 538 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 LRRC6Q86X45 466 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 SYTL1Q8IYJ3 562 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 FLVCR1-AS1Q8TAF5 88 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 N4BP2L2Q92802 583 aaPredicted RBP15.27■□□□□ 0.04
VRK3-221ENST00000600284 SLC22A18Q96BI1 424 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 PANX3Q96QZ0 392 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 DHRS4Q9BTZ2 278 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 EPN3Q9H201 632 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 MRM3Q9HC36 420 aaKnown RBP15.27■□□□□ 0.04
VRK3-221ENST00000600284 TCFL5Q9UL49 500 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 SNX7Q9UNH6 387 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 CDYLQ9Y232 598 aa15.27■□□□□ 0.04
VRK3-221ENST00000600284 ZNF749O43361 778 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 NRDCO43847 1150 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 CAPN1P07384 714 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 CD63P08962 238 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 TPSB2P20231 275 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 AGXTP21549 392 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 RPS3P23396 243 aaKnown RBP eCLIP15.26■□□□□ 0.03
VRK3-221ENST00000600284 AOAHP28039 575 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 GABRA4P48169 554 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 RAB28P51157 221 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
VRK3-221ENST00000600284 TPSAB1Q15661 275 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 KYNUQ16719 465 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 LCN10Q6JVE6 187 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 LRRC8BQ6P9F7 803 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 ASB18Q6ZVZ8 466 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 ENDOVQ8N8Q3 282 aaKnown RBP15.26■□□□□ 0.03
VRK3-221ENST00000600284 ADAMTS17Q8TE56 1095 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 C17orf62Q9BQA9 187 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 KIFC1Q9BW19 673 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 KLHL25Q9H0H3 589 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 FAM60AQ9NP50 221 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 SPHK1Q9NYA1 384 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 GNPTGQ9UJJ9 305 aa15.26■□□□□ 0.03
VRK3-221ENST00000600284 PCDHGA9Q9Y5G4 932 aaKnown RBP15.26■□□□□ 0.03
VRK3-221ENST00000600284 ASH1LQ9NR48 2969 aaKnown RBP15.25■□□□□ 0.03
VRK3-221ENST00000600284 H3BMH7 237 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 CEP104O60308 925 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 PKLRP30613 574 aa15.25■□□□□ 0.03
VRK3-221ENST00000600284 IL10RAQ13651 578 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms