RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NNMTP40261 264 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 GNPDA1P46926 289 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 STT3AP46977 705 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 PPP3CCP48454 512 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 NEDD8Q15843 81 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 C16orf87Q6PH81 154 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 Q6ZNB5 142 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 FAM86B1Q8N7N1 296 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 SLC13A3Q8WWT9 602 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 RIOK2Q9BVS4 552 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 SMOXQ9NWM0 555 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 OGDHLQ9ULD0 1010 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 CHD5Q8TDI0 1954 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 DNAH14Q0VDD8 3507 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 FRMPD3Q5JV73 1810 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 F5P12259 2224 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 TMEM202A6NGA9 273 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 NOBOXO60393 691 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZNF821O75541 412 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRMUO75648 421 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 KCNH1O95259 989 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 MATN4O95460 622 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZNF682O95780 498 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 SMIM18P0DKX4 95 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 POLR2EP19388 210 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 HSPA13P48723 471 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 CARD16Q5EG05 197 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 XKR7Q5GH72 579 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 FIBINQ8TAL6 211 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 LTB4R2Q9NPC1 389 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 PCDH12Q9NPG4 1184 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 UTS2RQ9UKP6 389 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 PDE10AQ9Y233 779 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 DLGAP4Q9Y2H0 992 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ABHD14A-ACY1A0A1B0GW23 586 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 GRM6O15303 877 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 SNAP29O95721 258 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 PDYNP01213 254 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 GBAP04062 536 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 ABCB1P08183 1280 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 PABPC4LP0CB38 370 aaKnown RBP11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 SYN1P17600 705 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 TACR1P25103 407 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 MAP4P27816 1152 aaKnown RBP11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 BNIP2Q12982 314 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 ANKRD33Q7Z3H0 272 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 DTWD1Q8N5C7 304 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR2T12Q8NG77 320 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 SCRN2Q96FV2 425 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 PPP3R2Q96LZ3 170 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 YIPF2Q9BWQ6 316 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 HPS4Q9NQG7 708 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 CCM2LQ9NUG4 571 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 EXD2Q9NVH0 621 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 KCTD5Q9NXV2 234 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZDHHC3Q9NYG2 299 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 MYRFQ9Y2G1 1151 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 PRKAB1Q9Y478 270 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 PCDHA9Q9Y5H5 950 aa11.27□□□□□ -0.6
ARHGEF1-220ENST00000600274 PLXNA3P51805 1871 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRR23AA6NEV1 266 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 H7C0S8 307 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 DENRO43583 198 aaKnown RBP11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 CLDN9O95484 217 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 KRT6AP02538 564 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 KRT6BP04259 564 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 NTRK1P04629 796 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 EPCAMP16422 314 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 KRT6CP48668 564 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 STARD3Q14849 445 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 PYCR3Q53H96 274 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 SUSD1Q6UWL2 747 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 GDPD4Q6W3E5 623 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 CCDC149Q6ZUS6 474 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 HSD11B1LQ7Z5J1 315 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZFAND4Q86XD8 727 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 HID1Q8IV36 788 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 VWCEQ96DN2 955 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZSWIM3Q96MP5 696 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 HTATIP2Q9BUP3 242 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ADI1Q9BV57 179 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 OSBPL11Q9BXB4 747 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ING2Q9H160 280 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 FAM83DQ9H4H8 585 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ACTL8Q9H568 366 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 IKZF5Q9H5V7 419 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 TDP1Q9NUW8 608 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 WARS2Q9UGM6 360 aaKnown RBP11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ADGRE2Q9UHX3 823 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 SARDHQ9UL12 918 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF232Q9UNY5 417 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 OARD1Q9Y530 152 aa11.27□□□□□ -0.61
ARHGEF1-220ENST00000600274 ATG2BQ96BY7 2078 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms