RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TSPAN17Q96FV3 270 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 POT1Q9NUX5 634 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 EURLQ9NYK6 297 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 TSR3Q9UJK0 312 aaKnown RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 RUVBL2Q9Y230 463 aaKnown RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 PCDHGA1Q9Y5H4 931 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 NFS1Q9Y697 457 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 TEX51A0A1B0GUA7 166 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 NUDT21O43809 227 aaKnown RBP18.35■□□□□ 0.53
CCDC9-205ENST00000600117 KRT38O76015 456 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 MATN4O95460 622 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 ALDOAP04075 364 aaKnown RBP18.35■□□□□ 0.53
CCDC9-205ENST00000600117 GLB1P16278 677 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 STMN1P16949 149 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 ACP1P24666 158 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 CNTFP26441 200 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 MAGEA12P43365 314 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 SLC12A2P55011 1212 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 RAB10P61026 200 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 DAB2P98082 770 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 HHEXQ03014 270 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 ABRQ12979 859 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 NR1D2Q14995 579 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 RASA2Q15283 850 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 PERM1Q5SV97 790 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 PIWIL4Q7Z3Z4 852 aaKnown RBP18.35■□□□□ 0.53
CCDC9-205ENST00000600117 ZNF438Q7Z4V0 828 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 AVL9Q8NBF6 648 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 PHC3Q8NDX5 983 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 EPS8L3Q8TE67 593 aaKnown RBP18.35■□□□□ 0.53
CCDC9-205ENST00000600117 ANKRD49Q8WVL7 239 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 CXorf40BQ96DE9 158 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 LINGO1Q96FE5 620 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 PPCSQ9HAB8 311 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 SLC40A1Q9NP59 571 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 LRIT1Q9P2V4 623 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 PSMC3IPQ9P2W1 217 aaPredicted RBP18.35■□□□□ 0.53
CCDC9-205ENST00000600117 CTNNAL1Q9UBT7 734 aa18.35■□□□□ 0.53
CCDC9-205ENST00000600117 TRIM49D1C9J1S8 452 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 VIPP01282 170 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 CDK4P11802 303 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 JUPP14923 745 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-205ENST00000600117 ACADVLP49748 655 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 RGS4P49798 205 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 DUSP3P51452 185 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-205ENST00000600117 CFHR1Q03591 330 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 UNC5DQ6UXZ4 953 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 TAOK1Q7L7X3 1001 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 EFL1Q7Z2Z2 1120 aaKnown RBP18.34■□□□□ 0.53
CCDC9-205ENST00000600117 GPR155Q7Z3F1 870 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 TRIM48Q8IWZ4 208 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 OR6C4Q8NGE1 309 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 OR5AR1Q8NGP9 310 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 NAT6Q93015 286 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 CCDC74AQ96AQ1 378 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 PDLIM5Q96HC4 596 aaKnown RBP18.34■□□□□ 0.53
CCDC9-205ENST00000600117 MVB12BQ9H7P6 319 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 GPAMQ9HCL2 828 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 SNX15Q9NRS6 342 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-205ENST00000600117 PLAAQ9Y263 795 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 ASF1AQ9Y294 204 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 HEBP2Q9Y5Z4 205 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 COL12A1Q99715 3063 aa18.34■□□□□ 0.53
CCDC9-205ENST00000600117 RP1P56715 2156 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 CPED1A4D0V7 1026 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SNRPAP09012 282 aaKnown RBP18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SLC35E2BP0CK96 405 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 PNLIPP16233 465 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 NDUFS1P28331 727 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 CRABP2P29373 138 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 GMPRP36959 345 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SLCO1A2P46721 670 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SERPINB8P50452 374 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 IL2P60568 153 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 RTP5Q14D33 572 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 LRRC8EQ6NSJ5 796 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 TMEM26Q6ZUK4 368 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 ZNF761Q86XN6 746 aaPredicted RBP18.33■□□□□ 0.52
CCDC9-205ENST00000600117 TBC1D21Q8IYX1 336 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 IQCKQ8N0W5 287 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 CFAP61Q8NHU2 1237 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SNIP1Q8TAD8 396 aaKnown RBP18.33■□□□□ 0.52
CCDC9-205ENST00000600117 IFI44Q8TCB0 444 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 MZB1Q8WU39 189 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SKA2Q8WVK7 121 aaPredicted RBP18.33■□□□□ 0.52
CCDC9-205ENST00000600117 FERD3LQ96RJ6 166 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 TMEM109Q9BVC6 243 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 STN1Q9H668 368 aaKnown RBP18.33■□□□□ 0.52
CCDC9-205ENST00000600117 KIR3DX1Q9H7L2 352 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 UCK1Q9HA47 277 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 SYTL2Q9HCH5 934 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 EVA1BQ9NVM1 165 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 IKZF3Q9UKT9 509 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 AK5Q9Y6K8 562 aa18.33■□□□□ 0.52
CCDC9-205ENST00000600117 LILRA5A6NI73 299 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 RHPN2P1A8MT19 583 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 PSIP1O75475 530 aaKnown RBP18.32■□□□□ 0.52
CCDC9-205ENST00000600117 C1orf105O95561 183 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms