RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ERVK-10P10266 1014 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 PRDX3P30048 256 aaKnown RBP16.22■□□□□ 0.19
SSBP4-204ENST00000597724 SHMT2P34897 504 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 UCNP55089 124 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 IL11RAQ14626 422 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 DUPD1Q68J44 220 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 UNC5AQ6ZN44 842 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 SIDT2Q8NBJ9 832 aaKnown RBP16.22■□□□□ 0.19
SSBP4-204ENST00000597724 C2CD4AQ8NCU7 369 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-204ENST00000597724 BBOF1Q8ND07 529 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 CFAP61Q8NHU2 1237 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 FAM136AQ96C01 138 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 CERS2Q96G23 380 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 PPM1MQ96MI6 270 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 WDR83Q9BRX9 315 aaKnown RBP16.22■□□□□ 0.19
SSBP4-204ENST00000597724 TWSG1Q9GZX9 223 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 OR6C2Q9NZP2 312 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 WHRNQ9P202 907 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 ZC3H7BQ9UGR2 993 aaKnown RBP16.22■□□□□ 0.19
SSBP4-204ENST00000597724 LHX6Q9UPM6 363 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 CHMP2BQ9UQN3 213 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 MED16Q9Y2X0 877 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 PCDHB11Q9Y5F2 797 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 PIPSLA2A3N6 862 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 GSAPA4D1B5 854 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 C2orf74A8MZ97 194 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 E7ESA3 106 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 URI1O94763 535 aaPredicted RBP16.21■□□□□ 0.19
SSBP4-204ENST00000597724 ZBTB11O95625 1053 aaPredicted RBP16.21■□□□□ 0.19
SSBP4-204ENST00000597724 FOLR1P15328 257 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 ATP5DP30049 168 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 ARL4DP49703 201 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 CLCN7P51798 805 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 HSD11B2P80365 405 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 MPP1Q00013 466 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 GRB7Q14451 532 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 KYNUQ16719 465 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 STEAP4Q687X5 459 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 FBXO38Q6PIJ6 1188 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 CNSTQ6PJW8 725 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 DCUN1D3Q8IWE4 304 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 CNTN4Q8IWV2 1026 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 D2HGDHQ8N465 521 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 ZBTB2Q8N680 514 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 GABPB2Q8TAK5 448 aaPredicted RBP16.21■□□□□ 0.19
SSBP4-204ENST00000597724 KCNJ9Q92806 393 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 CCNL2Q96S94 520 aaPredicted RBP16.21■□□□□ 0.19
SSBP4-204ENST00000597724 MENTQ9BUN1 341 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 PITPNM3Q9BZ71 974 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 CCDC68Q9H2F9 335 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 DPH5Q9H2P9 285 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 PRORYQ9H606 182 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 C1GALT1Q9NS00 363 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 PILRAQ9UKJ1 303 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 PLAGL1Q9UM63 463 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 NFS1Q9Y697 457 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 COMMD10Q9Y6G5 202 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 IGSF10Q6WRI0 2623 aa16.21■□□□□ 0.19
SSBP4-204ENST00000597724 LOC400499M0QZD8 3231 aa16.21■□□□□ 0.18
SSBP4-204ENST00000597724 SLC9B1P1A6NJY1 282 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 MATN4O95460 622 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 C1orf105O95561 183 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 FGF5P12034 268 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 CDH3P22223 829 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 TMPRSS3P57727 454 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 CKAP4Q07065 602 aaKnown RBP16.2■□□□□ 0.18
SSBP4-204ENST00000597724 PDIA2Q13087 525 aaKnown RBP16.2■□□□□ 0.18
SSBP4-204ENST00000597724 CALCOCO2Q13137 446 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 KCNAB1Q14722 419 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 ANKMY2Q8IV38 441 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 SKA2Q8WVK7 121 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-204ENST00000597724 NKD1Q969G9 470 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 CFAP36Q96G28 342 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 SLC30A3Q99726 388 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 CPNE5Q9HCH3 593 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 SPHK1Q9NYA1 384 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 ACTR10Q9NZ32 417 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 GRHL1Q9NZI5 618 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 KLHL42Q9P2K6 505 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 BTRCQ9Y297 605 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 DHRS7Q9Y394 339 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 TMEM184BQ9Y519 407 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-204ENST00000597724 FAM208BQ5VWN6 2430 aa16.2■□□□□ 0.18
SSBP4-204ENST00000597724 EFSO43281 561 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 AHSGP02765 367 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 TUBB4AP04350 444 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 CHRM5P08912 532 aaPredicted RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 EBLN1P0CF75 366 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 GABRB3P28472 473 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 PKLRP30613 574 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 CCNFP41002 786 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 CARSP49589 748 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 RAB28P51157 221 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 CXADRP78310 365 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 ACY1Q03154 408 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 TUBB3Q13509 450 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 FRG1Q14331 258 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 FASTKD3Q14CZ7 662 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 TTLL9Q3SXZ7 439 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 ACSBG2Q5FVE4 666 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms