RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SHMT2P34897 504 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CBSP35520 551 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 SKIV2L2P42285 1042 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 RGS4P49798 205 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CDKN2DP55273 166 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 ILF2Q12905 390 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 PDAP1Q13442 181 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 C16orf72Q14CZ0 275 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 NEK10Q6ZWH5 1172 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 ZC3HC1Q86WB0 502 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 AMIGO1Q86WK6 493 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CPNE9Q8IYJ1 553 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 FBXO39Q8N4B4 442 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 PPM1NQ8N819 430 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CPNE1Q99829 537 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 RAB33BQ9H082 229 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 CDC42EP4Q9H3Q1 356 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 RHOJQ9H4E5 214 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 XKR8Q9H6D3 395 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 POLR1BQ9H9Y6 1135 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 PDP2Q9P2J9 529 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 EPHA6Q9UF33 1036 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 PLAGL1Q9UM63 463 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 ICKQ9UPZ9 632 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 VWA7Q9Y334 891 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 LOXL2Q9Y4K0 774 aa19.1■□□□□ 0.65
SHKBP1-214ENST00000597396 FAM208BQ5VWN6 2430 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 FAM95CA0A1B0GW59 222 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 PLD2O14939 933 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 HGSO14964 777 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 RASSF9O75901 435 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 JMJD7P0C870 316 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 MPC1LP0DKB6 136 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 SAT1P21673 171 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 CCNFP41002 786 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 BDKRB1P46663 353 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 RTP5Q14D33 572 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 KBTBD12Q3ZCT8 623 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 FAM92BQ6ZTR7 304 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 RELL1Q8IUW5 271 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 MAGEC3Q8TD91 643 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 VPS39Q96JC1 886 aa19.09■□□□□ 0.65
SHKBP1-214ENST00000597396 ADAMTS20P59510 1910 aa19.08■□□□□ 0.65
SHKBP1-214ENST00000597396 GSAPA4D1B5 854 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 EIF3FO00303 357 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 MATN2O00339 956 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 MATN4O95460 622 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 C1orf105O95561 183 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 CD9P21926 228 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 FDXRP22570 491 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 GP5P40197 560 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 LSSP48449 732 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 PPP1CAP62136 330 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 TIAL1Q01085 375 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 NAB1Q13506 487 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 SLMAPQ14BN4 828 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 CACHD1Q5VU97 1274 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 LRRC8EQ6NSJ5 796 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 SPNS2Q8IVW8 549 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 AGBL5Q8NDL9 886 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 RAD51AP1Q96B01 352 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 NRTNQ99748 197 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 CIDEBQ9UHD4 219 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 SLC39A10Q9ULF5 831 aa19.08■□□□□ 0.64
SHKBP1-214ENST00000597396 A0A1W2PNU3 283 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 BTN3A3O00478 584 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 BTN3A1O00481 513 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 SLU7O95391 586 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 ACSL3O95573 720 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 C1QAP02745 245 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 CATP04040 527 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 HGFP14210 728 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 RBMS1P29558 406 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 SLC12A2P55011 1212 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 CYP4F3Q08477 520 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 PAQR3Q6TCH7 311 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 PIWIL4Q7Z3Z4 852 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 ARHGAP22Q7Z5H3 698 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 LSMEM2Q8N112 164 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 RAB42Q8N4Z0 105 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 CD180Q99467 661 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 RBBP8Q99708 897 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 OLFM1Q99784 485 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 CCDC86Q9H6F5 360 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 PISDQ9UG56 409 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 PCDHGA8Q9Y5G5 932 aa19.07■□□□□ 0.64
SHKBP1-214ENST00000597396 PMS2P1A4D2B8 440 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 TLCD2A6NGC4 264 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 C2orf74A8MZ97 194 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 TOX3O15405 576 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 KIF1CO43896 1103 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 BRINP1O60477 761 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 PSIP1O75475 530 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 TNFSF15O95150 251 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 ANKRD34CP0C6C1 535 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 PKLRP30613 574 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 SPRP35270 261 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 SEPHS1P49903 392 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 RAB28P51157 221 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 MAPK10P53779 464 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms