RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GBX1Q14549 363 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 KYNUQ16719 465 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 TAF1BQ53T94 588 aaPredicted RBP12.64□□□□□ -0.39
USE1-207ENST00000596136 CTSL3PQ5NE16 218 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 PLEKHS1Q5SXH7 462 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 TMTC4Q5T4D3 741 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 PTRHD1Q6GMV3 140 aaKnown RBP12.64□□□□□ -0.39
USE1-207ENST00000596136 NEPROQ6NW34 567 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 FBXO38Q6PIJ6 1188 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 SPESP1Q6UW49 350 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 CENPUQ71F23 418 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 KRT222Q8N1A0 295 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 TRAPPC9Q96Q05 1148 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 OR2A14Q96R47 310 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 TRIM56Q9BRZ2 755 aaKnown RBP12.64□□□□□ -0.39
USE1-207ENST00000596136 GPN2Q9H9Y4 310 aaPredicted RBP12.64□□□□□ -0.39
USE1-207ENST00000596136 INTS10Q9NVR2 710 aaKnown RBP12.64□□□□□ -0.39
USE1-207ENST00000596136 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 ACTR10Q9NZ32 417 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 SAMD15Q9P1V8 674 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 SAR1BQ9Y6B6 198 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 RPS6KL1Q9Y6S9 549 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
USE1-207ENST00000596136 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
USE1-207ENST00000596136 PIPSLA2A3N6 862 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 GSAPA4D1B5 854 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 ZNF891A8MT65 544 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 GOLGA8KD6RF30 607 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 GOLGA8TH3BQL2 631 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 GOLGA8MH3BSY2 632 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 DNALI1O14645 258 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 FANCGO15287 622 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 KDM1AO60341 852 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 USP1O94782 785 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 S1PR4O95977 384 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 RPN2P04844 631 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 CHRM5P08912 532 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 ST6GAL1P15907 406 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 F8A1P23610 371 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 ATP5DP30049 168 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 PKLRP30613 574 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 CSE1LP55060 971 aaKnown RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 DHX34Q14147 1143 aaKnown RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 TMED2Q15363 201 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 PPP1R7Q15435 360 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 TBR1Q16650 682 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 CASC4Q6P4E1 433 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 ZNF517Q6ZMY9 492 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 SYDE1Q6ZW31 735 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 UNC5BQ8IZJ1 945 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 KIAA1143Q96AT1 154 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 ELMO2Q96JJ3 720 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 LRFN5Q96NI6 719 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 NAPGQ99747 312 aaPredicted RBP12.63□□□□□ -0.39
USE1-207ENST00000596136 RNF14Q9UBS8 474 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 IL17BQ9UHF5 180 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 PADI1Q9ULC6 663 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 PCDHGA6Q9Y5G7 932 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 FAM169AQ9Y6X4 670 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
USE1-207ENST00000596136 EIF4E1BA6NMX2 242 aaKnown RBP12.62□□□□□ -0.39
USE1-207ENST00000596136 RECKO95980 971 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 CCNYL3P0C7X3 344 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 UGT2B7P16662 529 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 FMO4P31512 558 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 RAB28P51157 221 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 EIF3BP55884 814 aaKnown RBP12.62□□□□□ -0.39
USE1-207ENST00000596136 CYP4F2P78329 520 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 ABRQ12979 859 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 KIR2DS3Q14952 304 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 GPR19Q15760 415 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 ZNF789Q5FWF6 425 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 OTOAQ7RTW8 1153 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 EXD3Q8N9H8 876 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 EXTL1Q92935 676 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
USE1-207ENST00000596136 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 MED8Q96G25 268 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 RUNDC3BQ96NL0 473 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 CATSPER2Q96P56 530 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 SEMA4CQ9C0C4 833 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 LHX9Q9NQ69 397 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 SOHLH2Q9NX45 425 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 LNPEPQ9UIQ6 1025 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 TDRKHQ9Y2W6 561 aaKnown RBP12.62□□□□□ -0.39
USE1-207ENST00000596136 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
USE1-207ENST00000596136 SPTA1P02549 2419 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CTAGE9A4FU28 777 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 H3BMH7 237 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CPNE3O75131 537 aaKnown RBP12.61□□□□□ -0.39
USE1-207ENST00000596136 MATN4O95460 622 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms