RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TDRKHQ9Y2W6 561 aaKnown RBP18.78■□□□□ 0.6
PNKP-207ENST00000596014 ITGA2BP08514 1039 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 TPBGLP0DKB5 382 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 MPC1LP0DKB6 136 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 HOXB3P14651 431 aaPredicted RBP18.77■□□□□ 0.6
PNKP-207ENST00000596014 CSF2RBP32927 897 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 SLC12A2P55011 1212 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 USP10Q14694 798 aaKnown RBP18.77■□□□□ 0.6
PNKP-207ENST00000596014 UAP1Q16222 522 aaPredicted RBP18.77■□□□□ 0.6
PNKP-207ENST00000596014 WDR74Q6RFH5 385 aaPredicted RBP18.77■□□□□ 0.6
PNKP-207ENST00000596014 TMEM207Q6UWW9 146 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 ZNF574Q6ZN55 896 aaPredicted RBP18.77■□□□□ 0.6
PNKP-207ENST00000596014 PIWIL4Q7Z3Z4 852 aaKnown RBP18.77■□□□□ 0.6
PNKP-207ENST00000596014 OR4E2Q8NGC2 313 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 SLC44A1Q8WWI5 657 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 RSC1A1Q92681 617 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 NRTNQ99748 197 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 CAB39LQ9H9S4 337 aa18.77■□□□□ 0.6
PNKP-207ENST00000596014 CEP295Q9C0D2 2601 aa18.77■□□□□ 0.59
PNKP-207ENST00000596014 KIF26BQ2KJY2 2108 aa18.77■□□□□ 0.59
PNKP-207ENST00000596014 FAM149AA5PLN7 773 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 C1orf105O95561 183 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 IL2P60568 153 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 ISXQ2M1V0 245 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 LRRC8EQ6NSJ5 796 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 TMEM71Q6P5X7 295 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 TTC23LQ6PF05 361 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 DCUN1D3Q8IWE4 304 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 ASB11Q8WXH4 323 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 DEPDC7Q96QD5 511 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 DPYSL5Q9BPU6 564 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 POPDC3Q9HBV1 291 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 CSO75390 466 aaKnown RBP18.76■□□□□ 0.59
PNKP-207ENST00000596014 PSIP1O75475 530 aaKnown RBP18.76■□□□□ 0.59
PNKP-207ENST00000596014 TSPAN12O95859 305 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 ZNF37AP17032 561 aaPredicted RBP18.76■□□□□ 0.59
PNKP-207ENST00000596014 CCNFP41002 786 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 CAPZBP47756 277 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 PDX1P52945 283 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 TARDBPQ13148 414 aaKnown RBP eCLIP18.76■□□□□ 0.59
PNKP-207ENST00000596014 GRB7Q14451 532 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 ZNF460Q14592 562 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 KLHL35Q6PF15 583 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 B3GNT8Q7Z7M8 397 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 MARCH9Q86YJ5 346 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 SLITRK4Q8IW52 837 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 OR4D9Q8NGE8 314 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 LINGO1Q96FE5 620 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 TSPAN17Q96FV3 270 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 PAFAH2Q99487 392 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 SEMA6CQ9H3T2 930 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 SRMSQ9H3Y6 488 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 XKR8Q9H6D3 395 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 SYTL2Q9HCH5 934 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 GPAMQ9HCL2 828 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 HRASLS2Q9NWW9 162 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 TMEM9Q9P0T7 183 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 PLAGL1Q9UM63 463 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 ICKQ9UPZ9 632 aa18.76■□□□□ 0.59
PNKP-207ENST00000596014 EXOC1LA0A1B0GW35 172 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 HMX2A2RU54 273 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 GFYI3L273 518 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 INHBAP08476 426 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 STMN1P16949 149 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 BDKRB1P46663 353 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 ZFP36L1Q07352 338 aaKnown RBP18.75■□□□□ 0.59
PNKP-207ENST00000596014 CCSMST1Q4G0I0 132 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 AMIGO1Q86WK6 493 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 PLXDC1Q8IUK5 500 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 RASGRP3Q8IV61 690 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 MAGEC3Q8TD91 643 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 RAD51AP1Q96B01 352 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 PDLIM5Q96HC4 596 aaKnown RBP18.75■□□□□ 0.59
PNKP-207ENST00000596014 SCNM1Q9BWG6 230 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 RAB33BQ9H082 229 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 ZMYND15Q9H091 742 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 CIDEBQ9UHD4 219 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 KLK13Q9UKR3 277 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 IKBKGQ9Y6K9 419 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 AKAP13Q12802 2813 aa18.75■□□□□ 0.59
PNKP-207ENST00000596014 WDFY3Q8IZQ1 3526 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 FAM221BA6H8Z2 402 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 OR6C74A6NCV1 312 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 OR5K3A6NET4 321 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 ARHGEF33A8MVX0 844 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 CAPN5O15484 640 aaPredicted RBP18.74■□□□□ 0.59
PNKP-207ENST00000596014 KDM1AO60341 852 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 CATP04040 527 aaKnown RBP18.74■□□□□ 0.59
PNKP-207ENST00000596014 MPSTP25325 297 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 SHMT2P34897 504 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 HSD17B3P37058 310 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 MSH2P43246 934 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 ZKSCAN8Q15776 578 aaPredicted RBP18.74■□□□□ 0.59
PNKP-207ENST00000596014 MROH9Q5TGP6 573 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 OOSP2Q86WS3 158 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 IQCKQ8N0W5 287 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 MYO1HQ8N1T3 1032 aa18.74■□□□□ 0.59
PNKP-207ENST00000596014 GOLGA6L1Q8N7Z2 621 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms