RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 ZSCAN1Q8NBB4 408 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 LPGAT1Q92604 370 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 SLCO2A1Q92959 643 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 ZNF669Q96BR6 464 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-205ENST00000595028 RNF31Q96EP0 1072 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 PANX3Q96QZ0 392 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 NAPGQ99747 312 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-205ENST00000595028 PITPNM3Q9BZ71 974 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 XKR8Q9H6D3 395 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 C1GALT1Q9NS00 363 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 SOHLH2Q9NX45 425 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 POLG2Q9UHN1 485 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 LNPEPQ9UIQ6 1025 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 TLN1Q9Y490 2541 aaKnown RBP14.65□□□□□ -0.06
TRIM28-205ENST00000595028 SPTBP11277 2137 aa14.65□□□□□ -0.06
TRIM28-205ENST00000595028 LOC101059948A0A1B0GTJ6 334 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 SDR42E2A6NKP2 422 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 C2orf74A8MZ97 194 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 KIAA0754O94854 1291 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TIAF1O95411 115 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 AOAHP28039 575 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 STAT5AP42229 794 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TUBB4BP68371 445 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 ABHD18Q0P651 414 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 PTK6Q13882 451 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TUBB2AQ13885 445 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 SDCCAG8Q86SQ7 713 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 KIAA1143Q96AT1 154 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 CAPZA3Q96KX2 299 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TCF12Q99081 682 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TUBB2BQ9BVA1 445 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 GPN2Q9H9Y4 310 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 FGF21Q9NSA1 209 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 ACTR10Q9NZ32 417 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 ASIC3Q9UHC3 531 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 PCYOX1Q9UHG3 505 aa14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TDRKHQ9Y2W6 561 aaKnown RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 HEMK1Q9Y5R4 338 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 TEP1Q99973 2627 aaKnown RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 SPTAN1Q13813 2472 aaKnown RBP14.64□□□□□ -0.07
TRIM28-205ENST00000595028 ZCWPW2A0A1B0GU75 182 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 MAGEB16A2A368 324 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 SLC9B1P1A6NJY1 282 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 PFDN6O15212 129 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 KDM1AO60341 852 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 SPAG6O75602 509 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 SLCO2B1O94956 709 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 ITGB2P05107 769 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 TPBGLP0DKB5 382 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 PRDX3P30048 256 aaKnown RBP14.63□□□□□ -0.07
TRIM28-205ENST00000595028 ADARP55265 1226 aaKnown RBP14.63□□□□□ -0.07
TRIM28-205ENST00000595028 DHX34Q14147 1143 aaKnown RBP14.63□□□□□ -0.07
TRIM28-205ENST00000595028 GPR19Q15760 415 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 ANKRD20A4Q4UJ75 823 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 TMTC4Q5T4D3 741 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 NEPROQ6NW34 567 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 C6orf15Q6UXA7 325 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-205ENST00000595028 UNC5DQ6UXZ4 953 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 UNC5AQ6ZN44 842 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 TMEM135Q86UB9 458 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 BPHLQ86WA6 291 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-205ENST00000595028 CILP2Q8IUL8 1156 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 DCUN1D3Q8IWE4 304 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 UNC5BQ8IZJ1 945 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 AGGF1Q8N302 714 aaeCLIP14.63□□□□□ -0.07
TRIM28-205ENST00000595028 GALNT6Q8NCL4 622 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 STAMBPL1Q96FJ0 436 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 SLC45A3Q96JT2 553 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 BIRC8Q96P09 236 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 FCRL4Q96PJ5 515 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 SLC12A9Q9BXP2 914 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 FAM117AQ9C073 453 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 IGSF5Q9NSI5 407 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 IL1RAPL1Q9NZN1 696 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 OR6C2Q9NZP2 312 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 PLAGL1Q9UM63 463 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 SAR1BQ9Y6B6 198 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 RPS6KL1Q9Y6S9 549 aa14.63□□□□□ -0.07
TRIM28-205ENST00000595028 PIPSLA2A3N6 862 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 CTAGE9A4FU28 777 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 ZNF891A8MT65 544 aaPredicted RBP14.62□□□□□ -0.07
TRIM28-205ENST00000595028 H3BMM5 538 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 DNALI1O14645 258 aaPredicted RBP14.62□□□□□ -0.07
TRIM28-205ENST00000595028 TERTO14746 1132 aaKnown RBP14.62□□□□□ -0.07
TRIM28-205ENST00000595028 KPNA5O15131 536 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 FANCGO15287 622 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 NIPSNAP2O75323 286 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 UTP20O75691 2785 aaKnown RBP14.62□□□□□ -0.07
TRIM28-205ENST00000595028 USP1O94782 785 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 ESR1P03372 595 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 RPN2P04844 631 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 ST6GAL1P15907 406 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 UGT2B7P16662 529 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 PKLRP30613 574 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 FMO4P31512 558 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 PTGIRP43119 386 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 NFATC3Q12968 1075 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 ZNF470Q6ECI4 717 aa14.62□□□□□ -0.07
TRIM28-205ENST00000595028 PWWP2BQ6NUJ5 590 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms