RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZNF669Q96BR6 464 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ZNF501Q96CX3 271 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 FCRL4Q96PJ5 515 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 PANX3Q96QZ0 392 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 MENTQ9BUN1 341 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 TUBB2BQ9BVA1 445 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 ASIC3Q9UHC3 531 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 RARRES3Q9UL19 164 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 PLAGL1Q9UM63 463 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 CRYL1Q9Y2S2 319 aa17.91■□□□□ 0.46
SHKBP1-202ENST00000593764 CTAGE9A4FU28 777 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 C2orf74A8MZ97 194 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 USP1O94782 785 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 S1PR4O95977 384 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 STAT5AP42229 794 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 GRB7Q14451 532 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 GPR19Q15760 415 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 RNF187Q5TA31 235 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 CYB5D1Q6P9G0 228 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 SPESP1Q6UW49 350 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 C6orf15Q6UXA7 325 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 ZSCAN1Q8NBB4 408 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 SLC45A3Q96JT2 553 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 TRAPPC9Q96Q05 1148 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 OR2A14Q96R47 310 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 KCND1Q9NSA2 647 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 SPHK1Q9NYA1 384 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 OR6C2Q9NZP2 312 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 GALPQ9UBC7 116 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 IL17BQ9UHF5 180 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 MAD1L1Q9Y6D9 718 aa17.9■□□□□ 0.46
SHKBP1-202ENST00000593764 PIPSLA2A3N6 862 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 TERTO14746 1132 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 KPNA5O15131 536 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 NIPSNAP2O75323 286 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 ESR1P03372 595 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 PRB1P04280 392 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 F7P08709 466 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 CHRM5P08912 532 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 PVRP15151 417 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 F8A1P23610 371 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 GBX1Q14549 363 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 TMED2Q15363 201 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 KYNUQ16719 465 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 LINC00303Q3SY05 128 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 MSS51Q4VC12 460 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 TAF1BQ53T94 588 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 PLEKHS1Q5SXH7 462 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 UNC5DQ6UXZ4 953 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 OTOAQ7RTW8 1153 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 DENND6AQ8IWF6 608 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 KLHL7Q8IXQ5 586 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 CFAP61Q8NHU2 1237 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 KLHL25Q9H0H3 589 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 GPN2Q9H9Y4 310 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 LATS2Q9NRM7 1088 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 SOHLH2Q9NX45 425 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 LNPEPQ9UIQ6 1025 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 FAM169AQ9Y6X4 670 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 BOD1L1Q8NFC6 3051 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 SEC16AO15027 2179 aa17.89■□□□□ 0.45
SHKBP1-202ENST00000593764 PFDN6O15212 129 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 BANF1O75531 89 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 C1QL1O75973 258 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 MSL3P1P0C860 447 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 UGT2B7P16662 529 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 PEBP1P30086 187 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 PKLRP30613 574 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 CTBP1Q13363 440 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 LONRF1Q17RB8 773 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 TMTC4Q5T4D3 741 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 IZUMO3Q5VZ72 239 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 ZNF470Q6ECI4 717 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 PCGF5Q86SE9 256 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 TRIM73Q86UV7 250 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 HOOK3Q86VS8 718 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 LINC01555Q8NAE3 123 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 OR8K5Q8NH50 307 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 STAMBPL1Q96FJ0 436 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 AKIRIN1Q9H9L7 192 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 INTS10Q9NVR2 710 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 NFS1Q9Y697 457 aa17.88■□□□□ 0.45
SHKBP1-202ENST00000593764 CFAP46Q8IYW2 2715 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 H3BMM5 538 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 NKX2-8O15522 239 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 NTRK1P04629 796 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 ITGB2P05107 769 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 PKMP14618 531 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 RAB28P51157 221 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 DHX9Q08211 1270 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 THOC5Q13769 683 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 LY6DQ14210 128 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 ZIC1Q15915 447 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 PRAMEF17Q5VTA0 474 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 ZNF549Q6P9A3 640 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 SYDE1Q6ZW31 735 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 IGDCC3Q8IVU1 814 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 DCUN1D3Q8IWE4 304 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 C17orf53Q8N3J3 647 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms