RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 AAR2Q9Y312 384 aaKnown RBP14.28□□□□□ -0.12
PNKP-202ENST00000593706 ABCA12Q86UK0 2595 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 BTN3A3O00478 584 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 ZNF749O43361 778 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 ALPPP05187 535 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 CAPN1P07384 714 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 HADHAP40939 763 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 XIAPP98170 497 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 SNX20Q7Z614 316 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 AMIGO1Q86WK6 493 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 IQCKQ8N0W5 287 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 RBMXL3Q8N7X1 1067 aaKnown RBP14.27□□□□□ -0.13
PNKP-202ENST00000593706 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 GLIS1Q8NBF1 620 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 TTC13Q8NBP0 860 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 CLEC1AQ8NC01 280 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 LRRC45Q96CN5 670 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 TRAPPC9Q96Q05 1148 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 C17orf62Q9BQA9 187 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 DHRS4Q9BTZ2 278 aa14.27□□□□□ -0.13
PNKP-202ENST00000593706 GPN3Q9UHW5 284 aaPredicted RBP14.27□□□□□ -0.13
PNKP-202ENST00000593706 C17orf113A0A1B0GUU1 675 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 CCL22O00626 93 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 LDB2O43679 373 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 KRT86O43790 486 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 METTL18O95568 372 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 DDAH2O95865 285 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 MC4RP32245 332 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 FOLR3P41439 243 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 ZNF140P52738 457 aaPredicted RBP14.26□□□□□ -0.13
PNKP-202ENST00000593706 PRKG2Q13237 762 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 OASLQ15646 514 aaKnown RBP14.26□□□□□ -0.13
PNKP-202ENST00000593706 MEI1Q5TIA1 1274 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 VWA5B1Q5TIE3 1220 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 CDHR3Q6ZTQ4 885 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 MRGPREQ86SM8 312 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 LRRC8AQ8IWT6 810 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 PHC3Q8NDX5 983 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 UBE2Q2Q8WVN8 375 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 ATG4AQ8WYN0 398 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 IP6K3Q96PC2 410 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 SMAD5Q99717 465 aaKnown RBP14.26□□□□□ -0.13
PNKP-202ENST00000593706 NRTNQ99748 197 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 OR52A5Q9H2C5 316 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 TFB2MQ9H5Q4 396 aaKnown RBP14.26□□□□□ -0.13
PNKP-202ENST00000593706 XKR8Q9H6D3 395 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 MVB12BQ9H7P6 319 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 IRAK4Q9NWZ3 460 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 ZDHHC3Q9NYG2 299 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 ACTR10Q9NZ32 417 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 GUCA1BQ9UMX6 200 aa14.26□□□□□ -0.13
PNKP-202ENST00000593706 GOLGA6L9A6NEM1 432 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 AGAP14A8MT82 685 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 PEX12O00623 359 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 OR2B3O76000 313 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 PDHA2P29803 388 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 CD151P48509 253 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 NR6A1Q15406 480 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 SIX1Q15475 284 aaPredicted RBP14.25□□□□□ -0.13
PNKP-202ENST00000593706 DEFB110Q30KQ9 67 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 ZRANB3Q5FWF4 1079 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 MLIPQ5VWP3 458 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 LYPLAL1Q5VWZ2 237 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 SPESP1Q6UW49 350 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 C19orf47Q8N9M1 422 aaKnown RBP14.25□□□□□ -0.13
PNKP-202ENST00000593706 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.25□□□□□ -0.13
PNKP-202ENST00000593706 FER1L6-AS2Q96M78 137 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 PPP1R2P1Q96PQ5 205 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 C19orf43Q9BQ61 176 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 TBL1YQ9BQ87 522 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 TMEM121Q9BTD3 319 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 ILKAPQ9H0C8 392 aaPredicted RBP14.25□□□□□ -0.13
PNKP-202ENST00000593706 C5AR2Q9P296 337 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 NDOR1Q9UHB4 597 aa14.25□□□□□ -0.13
PNKP-202ENST00000593706 PTRH2Q9Y3E5 179 aaKnown RBP14.25□□□□□ -0.13
PNKP-202ENST00000593706 CSMD1Q96PZ7 3565 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 LIASO43766 372 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 ACRV1P26436 265 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 RPA4Q13156 261 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 BOP1Q14137 746 aaKnown RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 ELOAQ14241 798 aaKnown RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 SPARCL1Q14515 664 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 PARP6Q2NL67 630 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 GPR33Q49SQ1 333 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 C1orf189Q5VU69 101 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 ZNF385CQ66K41 422 aaPredicted RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 TAS2R42Q7RTR8 314 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 MAMDC2Q7Z304 686 aaPredicted RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 TRIM73Q86UV7 250 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 SERPINA9Q86WD7 417 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 SLC13A5Q86YT5 568 aaPredicted RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 ADGRF3Q8IZF5 1079 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 GALNT16Q8N428 558 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 TFGQ92734 400 aaPredicted RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 SNRNP40Q96DI7 357 aaKnown RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 C19orf60Q96EN9 201 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 DNAJC1Q96KC8 554 aaKnown RBP14.24□□□□□ -0.13
PNKP-202ENST00000593706 TXLNGQ9NUQ3 528 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 ASF1BQ9NVP2 202 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 IFT80Q9P2H3 777 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms